RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 EFHBQ8N7U6 833 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 ING5Q8WYH8 240 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 CPSF2Q9P2I0 782 aaKnown RBP19.41■□□□□ 0.7
SSU72-204ENST00000378726 ANGPTL2Q9UKU9 493 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 VWA7Q9Y334 891 aa19.41■□□□□ 0.7
SSU72-204ENST00000378726 MRPS23Q9Y3D9 190 aaKnown RBP19.41■□□□□ 0.7
SSU72-204ENST00000378726 SLC4A1P02730 911 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 RALBP11234 206 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 LPOP22079 712 aaPredicted RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 EPHB1P54762 984 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 FOXB2Q5VYV0 432 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 SDCCAG8Q86SQ7 713 aaPredicted RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 CENPLQ8N0S6 344 aaPredicted RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 NXNL1Q96CM4 212 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 BBS2Q9BXC9 721 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 CATSPERZQ9NTU4 200 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 TBC1D14Q9P2M4 693 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 CRYL1Q9Y2S2 319 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 RANBP2P49792 3224 aaKnown RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 MEI4A8MW99 385 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 G3V2L1 256 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 CIB2O75838 187 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 PENKP01210 267 aaPredicted RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 CTSOP43234 321 aaPredicted RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 GLRBP48167 497 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 ACTR3P61158 418 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 RBBP5Q15291 538 aaKnown RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 ZNF77Q15935 545 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 DGKKQ5KSL6 1271 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 ARMC12Q5T9G4 340 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 ASTLQ6HA08 431 aaPredicted RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 METTL3Q86U44 580 aaKnown RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 EGFL6Q8IUX8 553 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 ADGRG2Q8IZP9 1017 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 SPATA6LQ8N4H0 392 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 C12orf76Q8N812 135 aaPredicted RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 SCYL1Q96KG9 808 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 OLFM1Q99784 485 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 SPHK2Q9NRA0 654 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 YBX2Q9Y2T7 364 aaKnown RBP19.4■□□□□ 0.7
SSU72-204ENST00000378726 CDH23Q9H251 3354 aa19.4■□□□□ 0.7
SSU72-204ENST00000378726 NOTCH4Q99466 2003 aa19.39■□□□□ 0.7
SSU72-204ENST00000378726 ZNF821O75541 412 aaPredicted RBP19.39■□□□□ 0.69
SSU72-204ENST00000378726 SERPINE1P05121 402 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 APOA4P06727 396 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 CEBPBP17676 345 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 SLC1A6P48664 564 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 BCL2L1Q07817 233 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 ITGA9Q13797 1035 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 SEMA3AQ14563 771 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 TRMT5Q32P41 509 aaKnown RBP19.39■□□□□ 0.69
SSU72-204ENST00000378726 HECTD2Q5U5R9 776 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 TMEM151AQ8N4L1 468 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 ITFG1Q8TB96 612 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 TNKS2Q9H2K2 1166 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 A0A087X1B8 175 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 KLHL33A6NCF5 533 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 MAGEA13PA6NCF6 341 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 ANKRD33BA6NCL7 494 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 ITM2AO43736 263 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 LYPLA1O75608 230 aaPredicted RBP19.39■□□□□ 0.69
SSU72-204ENST00000378726 KLHL2O95198 593 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 SERPINA6P08185 405 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 GRK2P25098 689 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 PMLP29590 882 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 GKP32189 559 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 PBX2P40425 430 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 CSNK1DP48730 415 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 DLG1Q12959 904 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 DNAL1Q4LDG9 190 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 SLC30A9Q6PML9 568 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 FSTL5Q8N475 847 aaPredicted RBP19.39■□□□□ 0.69
SSU72-204ENST00000378726 GPR78Q96P69 363 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 ZMYM5Q9UJ78 669 aa19.39■□□□□ 0.69
SSU72-204ENST00000378726 A0A0U1RQS6 177 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.38■□□□□ 0.69
SSU72-204ENST00000378726 PGLSO95336 258 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 BAG2O95816 211 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 PRSS56P0CW18 603 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 SRCP12931 536 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 TYRP14679 529 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 PSMA3P25788 255 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 STK19P49842 368 aaPredicted RBP19.38■□□□□ 0.69
SSU72-204ENST00000378726 LY6G5CQ5SRR4 150 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 C1orf146Q5VVC0 180 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 ELMSAN1Q6PJG2 1045 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 RYBPQ8N488 228 aaPredicted RBP19.38■□□□□ 0.69
SSU72-204ENST00000378726 PIH1D2Q8WWB5 315 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 TSPAN17Q96FV3 270 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 TTC1Q99614 292 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 BPIFA1Q9NP55 256 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 PAPOLBQ9NRJ5 636 aaKnown RBP19.38■□□□□ 0.69
SSU72-204ENST00000378726 HACD3Q9P035 362 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 PPM1HQ9ULR3 514 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 WNT6Q9Y6F9 365 aa19.38■□□□□ 0.69
SSU72-204ENST00000378726 TK2O00142 265 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 STX7O15400 261 aaKnown RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 SNUPNO95149 360 aaKnown RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 PIGNO95427 931 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 IGSF6O95976 241 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms