RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 HID1Q8IV36 788 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 RTL3Q8N8U3 475 aaKnown RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 TMC2Q8TDI7 906 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF431Q8TF32 576 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 SLC29A1Q99808 456 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 MED10Q9BTT4 135 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 FUNDC2Q9BWH2 189 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 C1QTNF7Q9BXJ2 289 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 PPIL3Q9H2H8 161 aaKnown RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 KCTD10Q9H3F6 313 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 FAM83DQ9H4H8 585 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 TRPM5Q9NZQ8 1165 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 ACAD8Q9UKU7 415 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 SNX6Q9UNH7 406 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 DFNA5O60443 496 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 PIAS1O75925 651 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 SLITRK5O94991 958 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 EFNA5P52803 228 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 LRRC74AQ0VAA2 488 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 DSG2Q14126 1118 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 PLA2G4FQ68DD2 849 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 CDKL3Q8IVW4 592 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 CLHC1Q8NHS4 586 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 SLC44A1Q8WWI5 657 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 SLC2A11Q9BYW1 496 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 C2orf40Q9H1Z8 148 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 DCSTAMPQ9H295 470 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 RIBC2Q9H4K1 309 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 JPH1Q9HDC5 661 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 ERVK-19Q9WJR5 959 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 NRXN3Q9Y4C0 1643 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF879B4DU55 563 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CST8O60676 142 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 PIGNO95427 931 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 MAPTP10636 758 aaKnown RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 SHMT1P34896 483 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 ABRQ12979 859 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CAPRIN1Q14444 709 aaKnown RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 FAM83AQ86UY5 434 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 SLC47A2Q86VL8 602 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CENPNQ96H22 339 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 PELOQ9BRX2 385 aaKnown RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 XKR8Q9H6D3 395 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 FAM49BQ9NUQ9 324 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 IL37Q9NZH6 218 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 AKT3Q9Y243 479 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 U3KQV3 271 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 M0QYV0 167 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 MRASO14807 208 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 KLF11O14901 512 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 BCAS2O75934 225 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 NUDT7P0C024 238 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 JUPP14923 745 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 AIF1P55008 147 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CHRNB3Q05901 458 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CDC20Q12834 499 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 ADAM15Q13444 863 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CDKL4Q5MAI5 379 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CHMP1BQ7LBR1 199 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 TRIM69Q86WT6 500 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 LACC1Q8IV20 430 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 SRFBP1Q8NEF9 429 aaKnown RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 OR6P1Q8NGX9 317 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 LPAR1Q92633 364 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 FOPNLQ96NB1 174 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 SEPHS2Q99611 448 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 RAB6BQ9NRW1 208 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 RIMKLBQ9ULI2 386 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 MAB21L2Q9Y586 359 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 EFCAB9A8MZ26 197 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 FAM86B1E9PN63 330 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 WWP2O00308 870 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 FSCN2O14926 492 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 NOL4O94818 638 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CCNDBP1O95273 360 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 APOC3P02656 99 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 BPGMP07738 259 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 AZGP1P25311 298 aaKnown RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 ARNTP27540 789 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 TIMM50Q3ZCQ8 353 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 AGKQ53H12 422 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 RBM48Q5RL73 367 aaKnown RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 HEATR6Q6AI08 1181 aaKnown RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 ADGRD1Q6QNK2 874 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 ZDHHC13Q8IUH4 622 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 PTERQ96BW5 349 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF597Q96LX8 424 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 LRRC40Q9H9A6 602 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 NANOGQ9H9S0 305 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 OLAHQ9NV23 265 aa11.75□□□□□ -0.53
NPHP4-202ENST00000378161 CHD2O14647 1828 aaKnown RBP11.75□□□□□ -0.53
NPHP4-202ENST00000378161 FAM149AA5PLN7 773 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 SLCO1B7G3V0H7 640 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 LYPLA1O75608 230 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-202ENST00000378161 CYP7B1O75881 506 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 OAZ2O95190 189 aa11.74□□□□□ -0.53
NPHP4-202ENST00000378161 TGM6O95932 706 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms