RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 GBA3Q9H227 469 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 ARVCFO00192 962 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 PRMT3O60678 531 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 PKMP14618 531 aaKnown RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 ITGA2P17301 1181 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 RSBN1Q5VWQ0 802 aaPredicted RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 TRIM40Q6P9F5 258 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 PHF10Q8WUB8 498 aaKnown RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 METTL21AQ8WXB1 218 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 ELOVL2Q9NXB9 296 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 IGLV3-22A0A075B6J6 115 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 NFKBIEO00221 500 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 PRG2P13727 222 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 CDH3P22223 829 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 PBX3P40426 434 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 GABRB2P47870 512 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 YBEYP58557 167 aaPredicted RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 SLC25A3Q00325 362 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 SPIBQ01892 262 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 BST1Q10588 318 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 UBAP2LQ14157 1087 aaKnown RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 LPCAT2Q7L5N7 544 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 SMYD1Q8NB12 490 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 MAGEE2Q8TD90 523 aaPredicted RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 C2orf15Q8WU43 125 aaKnown RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 FAM83DQ9H4H8 585 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 ZNF490Q9ULM2 529 aaPredicted RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 PCDHGC4Q9Y5F7 938 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 MYO5BQ9ULV0 1848 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 CENPXA8MT69 81 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 E7ENQ6 273 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 ILF3Q12906 894 aaKnown RBP eCLIP13.6□□□□□ -0.23
GPC6-201ENST00000377047 NRF1Q16656 503 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 RAD51AP1Q96B01 352 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 ZNF607Q96SK3 696 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 OLFM1Q99784 485 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 NDUFA13Q9P0J0 144 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 MRTO4Q9UKD2 239 aaKnown RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 PSMD13Q9UNM6 376 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 ABHD14A-ACY1A0A1B0GW23 586 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 IQCF5A8MTL0 148 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 PRAMEF1O95521 474 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 GBE1Q04446 702 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 C9orf64Q5T6V5 341 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 ARCQ7LC44 396 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 PYROXD2Q8N2H3 581 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 TCAIMQ8N3R3 496 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 STYXQ8WUJ0 223 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 REXO4Q9GZR2 422 aaKnown RBP13.59□□□□□ -0.23
GPC6-201ENST00000377047 KLF15Q9UIH9 416 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 EFCAB10A6NFE3 127 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 SERPINB7O75635 380 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 C22orf31O95567 290 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 CCNCP24863 283 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 EPHA3P29320 983 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
GPC6-201ENST00000377047 CCNYL2Q5T2Q4 361 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 CLHC1Q8NHS4 586 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 SLC38A2Q96QD8 506 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 SEZ6LQ9BYH1 1024 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 ACSS3Q9H6R3 686 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 ARHGEF3Q9NR81 526 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 AFDNP55196 1824 aaKnown RBP13.59□□□□□ -0.23
GPC6-201ENST00000377047 LYPLA1O75608 230 aaPredicted RBP13.59□□□□□ -0.23
GPC6-201ENST00000377047 PSME3P61289 254 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 DUPD1Q68J44 220 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 DENND6AQ8IWF6 608 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 KLK6Q92876 244 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 MECRQ9BV79 373 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 ABCB8Q9NUT2 735 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 INSIG1O15503 277 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 PDE9AO76083 593 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 TFPIP10646 304 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 BMP7P18075 431 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 HTR7P34969 479 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 PRKG2Q13237 762 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 RNASEH2BQ5TBB1 312 aaKnown RBP13.59□□□□□ -0.23
GPC6-201ENST00000377047 SNX30Q5VWJ9 437 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 LDB1Q86U70 411 aaPredicted RBP13.59□□□□□ -0.23
GPC6-201ENST00000377047 ECHDC2Q86YB7 292 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 AUTS2Q8WXX7 1259 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 MIEF2Q96C03 454 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 KLHL32Q96NJ5 620 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 MAGEH1Q9H213 219 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 RHOJQ9H4E5 214 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 DNAJC11Q9NVH1 559 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 GALNT8Q9NY28 637 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 CACNG4Q9UBN1 327 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 PACSIN3Q9UKS6 424 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 CMPK1P30085 196 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 ST13P50502 369 aaKnown RBP13.59□□□□□ -0.23
GPC6-201ENST00000377047 MAPK10P53779 464 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 UGT2B15P54855 530 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 SMIM11AP58511 58 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 TAS2R41P59536 307 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 TTMPQ5BVD1 217 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 POMZP3Q6PJE2 187 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 HDDC3Q8N4P3 179 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms