RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ZNF613Q6PF04 617 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 LACRTQ9GZZ8 138 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 CLIC5Q9NZA1 410 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ZNF224Q9NZL3 707 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 PLCL2Q9UPR0 1127 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 DMTF1Q9Y222 760 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SALL1Q9NSC2 1324 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 TSPAN4O14817 238 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 FADS2O95864 444 aaKnown RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 TRUB2O95900 331 aaKnown RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ATXN1P54253 815 aaKnown RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 MEA1Q16626 185 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SNAP47Q5SQN1 464 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 OR2L3Q8NG85 312 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 PPP1R13LQ8WUF5 828 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 FPGTO14772 594 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 C4orf46Q504U0 113 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 C9orf131Q5VYM1 1079 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 C17orf64Q86WR6 236 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 BEND7Q8N7W2 519 aaPredicted RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SYTL5Q8TDW5 730 aaPredicted RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 BORCS5Q969J3 196 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SENP8Q96LD8 212 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 RB1P06400 928 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 RARAP10276 462 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 PTGS2P35354 604 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 GPR135Q8IZ08 494 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 TNS4Q8IZW8 715 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ARMC10Q8N2F6 343 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 OR8D1Q8WZ84 308 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 MCMBPQ9BTE3 642 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 MUC13Q9H3R2 512 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 KIF13AQ9H1H9 1805 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 RGS10O43665 173 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 FSBPO95073 299 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 CTNNB1P35222 781 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 DNASE1L1P49184 302 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SLC12A3P55017 1021 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 LARS2Q15031 903 aaKnown RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 CLP1Q92989 425 aaKnown RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 TELO2Q9Y4R8 837 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 AK5Q9Y6K8 562 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 CACNA1SQ13698 1873 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 FGF1P05230 155 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ISLR2Q6UXK2 745 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SLCO6A1Q86UG4 719 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SGK2Q9HBY8 427 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 COLEC10Q9Y6Z7 277 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 GMFGO60234 142 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 CTSKP43235 329 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 MGME1Q9BQP7 344 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ZMPSTE24O75844 475 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 TFEBP19484 476 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 PSMA1P25786 263 aaKnown RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SSR2P43308 183 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 NAGLUP54802 743 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ROR2Q01974 943 aaKnown RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 FAM153CQ494X1 144 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ZC3H12AQ5D1E8 599 aaKnown RBP12.45□□□□□ -0.42
VPS13A-204ENST00000376634 WSCD1Q658N2 575 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 FAM183BPQ6ZVS7 135 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ZNF554Q86TJ5 538 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 GPALPP1Q8IXQ4 340 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 SETD6Q8TBK2 473 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 HTRA1Q92743 480 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 EHD1Q9H4M9 534 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 GGA2Q9UJY4 613 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ERCC6L2Q5T890 1561 aa12.45□□□□□ -0.42
VPS13A-204ENST00000376634 ASMTP46597 345 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 RAB43Q86YS6 212 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 NUP50Q9UKX7 468 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ADH1AP07327 375 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 MRPS6P82932 125 aaKnown RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 DGLUCYQ7Z3D6 616 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 HDAC7Q8WUI4 952 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 RPTORQ8N122 1335 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ERAL1O75616 437 aaKnown RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 GLRA2P23416 452 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 GNALP38405 381 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 GJA8P48165 433 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 CDKAL1Q5VV42 579 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 GPR107Q5VW38 600 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 NIPA1Q7RTP0 329 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 OR8H3Q8N146 312 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 EIF1ADQ8N9N8 165 aaKnown RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 GIPC3Q8TF64 312 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 HEXDCQ8WVB3 486 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 TMX2Q9Y320 296 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 FAM153BP0C7A2 387 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 RBL1P28749 1068 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 IL12BP29460 328 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ARL3P36405 182 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ZNF155Q12901 538 aaPredicted RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 SGCDQ92629 289 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 TCF12Q99081 682 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 BTRCQ9Y297 605 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 NRCAMQ92823 1304 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ISM1B1AKI9 464 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms