RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 HEMGNQ9BXL5 484 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 OSBPL8Q9BZF1 889 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 LRRN3Q9H3W5 708 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 PDFQ9HBH1 243 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 DTLQ9NZJ0 730 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 GULP1Q9UBP9 304 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 APPL1Q9UKG1 709 aa12.2□□□□□ -0.46
LSM2-208ENST00000375661 SPTA1P02549 2419 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 A0A1W2PQM1 296 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 CASC3O15234 703 aaKnown RBP12.19□□□□□ -0.46
LSM2-208ENST00000375661 KIF5CO60282 957 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 MAFKO60675 156 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 MMP20O60882 483 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 PEX11BO96011 259 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 ZFXP17010 805 aaPredicted RBP12.19□□□□□ -0.46
LSM2-208ENST00000375661 GKP32189 559 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 DYNLT1P63172 113 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 CCL7P80098 99 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 ZFP36L1Q07352 338 aaKnown RBP12.19□□□□□ -0.46
LSM2-208ENST00000375661 SRSF1Q07955 248 aaKnown RBP eCLIP12.19□□□□□ -0.46
LSM2-208ENST00000375661 IL10RBQ08334 325 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 ELP6Q0PNE2 266 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 TFDP2Q14188 446 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 NFATC4Q14934 902 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 AGERQ15109 404 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 IRF4Q15306 451 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 CYTH1Q15438 398 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 TMEM52BQ4KMG9 183 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 MANEAQ5SRI9 462 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 ZNF574Q6ZN55 896 aaPredicted RBP12.19□□□□□ -0.46
LSM2-208ENST00000375661 BBS12Q6ZW61 710 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 HID1Q8IV36 788 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 HCAR2Q8TDS4 363 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 LRRN4Q8WUT4 740 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 EXTL1Q92935 676 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 GDAP1L1Q96MZ0 367 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 CPEB1Q9BZB8 566 aaKnown RBP12.19□□□□□ -0.46
LSM2-208ENST00000375661 MBNL1Q9NR56 388 aaKnown RBP12.19□□□□□ -0.46
LSM2-208ENST00000375661 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 RABGEF1Q9UJ41 708 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 GPR34Q9UPC5 381 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 EFR3BQ9Y2G0 817 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 LOXL2Q9Y4K0 774 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 PCDHB11Q9Y5F2 797 aa12.19□□□□□ -0.46
LSM2-208ENST00000375661 AHCTF1Q8WYP5 2266 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 PPFIA2O75334 1257 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 IGSF6O95976 241 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 CELA2BP08218 269 aaPredicted RBP12.18□□□□□ -0.46
LSM2-208ENST00000375661 GLB1P16278 677 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 PECAM1P16284 738 aaPredicted RBP12.18□□□□□ -0.46
LSM2-208ENST00000375661 GARSP41250 739 aaKnown RBP12.18□□□□□ -0.46
LSM2-208ENST00000375661 GRM3Q14832 879 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 LRRC14Q15048 493 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 TGIF1Q15583 401 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 ALG11Q2TAA5 492 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 INO80DQ53TQ3 878 aaPredicted RBP12.18□□□□□ -0.46
LSM2-208ENST00000375661 ENPP7Q6UWV6 458 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 CCNJLQ8IV13 435 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 ATPAF2Q8N5M1 289 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 GPR156Q8NFN8 814 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 OLFM3Q96PB7 478 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 CMKLR1Q99788 373 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 FOXP3Q9BZS1 431 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 TRIM4Q9C037 500 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 CARD9Q9H257 536 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 ADNPQ9H2P0 1102 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 SIRPGQ9P1W8 387 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 SAE1Q9UBE0 346 aaPredicted RBP12.18□□□□□ -0.46
LSM2-208ENST00000375661 PISDQ9UG56 409 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 JRKLQ9Y4A0 524 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 HEY1Q9Y5J3 304 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 DGKBQ9Y6T7 804 aa12.18□□□□□ -0.46
LSM2-208ENST00000375661 ARHGEF17Q96PE2 2063 aaPredicted RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 TMCC1O94876 653 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 TNFP01375 233 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 ATP1A1P05023 1023 aaKnown RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 TIMP2P16035 220 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 MX2P20592 715 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 XPAP23025 273 aaPredicted RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 CETN2P41208 172 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 SRP54P61011 504 aaKnown RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 KLF1Q13351 362 aaPredicted RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 WSCD2Q2TBF2 565 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 OGFOD3Q6PK18 319 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 DTX1Q86Y01 620 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 LRRC49Q8IUZ0 686 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 TSACCQ96A04 125 aaPredicted RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 HAUS1Q96CS2 278 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 HDAC11Q96DB2 347 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 TSGA13Q96PP4 275 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 WDR24Q96S15 920 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 RBM15Q96T37 977 aaKnown RBP eCLIP12.17□□□□□ -0.46
LSM2-208ENST00000375661 APOOQ9BUR5 198 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 SP110Q9HB58 689 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 GEMIN8Q9NWZ8 242 aaKnown RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 UBA2Q9UBT2 640 aaPredicted RBP12.17□□□□□ -0.46
LSM2-208ENST00000375661 KLQ9UEF7 1012 aa12.17□□□□□ -0.46
LSM2-208ENST00000375661 HECTD1Q9ULT8 2610 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms