RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 OR52B2Q96RD2 323 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 FAM83CQ9BQN1 747 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 DUS2Q9NX74 493 aaKnown RBP15.55■□□□□ 0.08
CCDC40-202ENST00000374876 SH3BP1Q9Y3L3 701 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 OTOL1A6NHN0 477 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-202ENST00000374876 TARM1B6A8C7 271 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 ZBTB14O43829 449 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 DLX3O60479 287 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 STC2O76061 302 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 COX4I1P13073 169 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 TCF3P15923 654 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 CCR10P46092 362 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 AP2B1P63010 937 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 KLF10Q13118 480 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 CUL3Q13618 768 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 RALGPS1Q5JS13 557 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 FBXL22Q6P050 247 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 UBALD2Q8IYN6 164 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 KIRREL3Q8IZU9 778 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 OSCP1Q8WVF1 389 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 SCG3Q8WXD2 468 aaKnown RBP15.55■□□□□ 0.08
CCDC40-202ENST00000374876 EDAQ92838 391 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 IRF7Q92985 503 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 GPR78Q96P69 363 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 RANBP9Q96S59 729 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 MRPL57Q9BQC6 102 aaKnown RBP15.55■□□□□ 0.08
CCDC40-202ENST00000374876 MRPL46Q9H2W6 279 aaKnown RBP15.55■□□□□ 0.08
CCDC40-202ENST00000374876 ATP13A1Q9HD20 1204 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 HEBP1Q9NRV9 189 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 VTI1BQ9UEU0 232 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 CA14Q9ULX7 337 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 WASF2Q9Y6W5 498 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 IGLV3-10A0A075B6K4 115 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 GOLGA8QA0A0J9YX86 632 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 GOLGA8OA6NCC3 632 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 GOLGA8NF8WBI6 632 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 SLCO1B7G3V0H7 640 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 ARNTLO00327 626 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 NEMP1O14524 444 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 GREM1O60565 184 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 KLKB1P03952 638 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 ARSAP15289 507 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 TFEBP19484 476 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 GLDCP23378 1020 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 DSC2Q02487 901 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 DLG1Q12959 904 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 TSTD2Q5T7W7 516 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 CNSTQ6PJW8 725 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 ACAD11Q709F0 780 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 MYLK4Q86YV6 388 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-202ENST00000374876 BBS7Q8IWZ6 715 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 LMNTD2Q8IXW0 634 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 CCNYL1Q8N7R7 359 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 IGSF8Q969P0 613 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 PPP1R36Q96LQ0 422 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 RPRD1AQ96P16 312 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-202ENST00000374876 OMDQ99983 421 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 UNKQ9C0B0 810 aaKnown RBP15.54■□□□□ 0.08
CCDC40-202ENST00000374876 WDR55Q9H6Y2 383 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-202ENST00000374876 GPAMQ9HCL2 828 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 SLC2A4RGQ9NR83 387 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 FBXL21Q9UKT6 434 aa15.54■□□□□ 0.08
CCDC40-202ENST00000374876 DLL1O00548 723 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 RAMP2O60895 175 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 ERFP50548 548 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 EPHB1P54762 984 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 POLD3Q15054 466 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-202ENST00000374876 FRMD7Q6ZUT3 714 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 ADGRG2Q8IZP9 1017 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 ACTRT2Q8TDY3 377 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 HEXDCQ8WVB3 486 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 NUF2Q9BZD4 464 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 HPS4Q9NQG7 708 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 ZDHHC2Q9UIJ5 367 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 AURKAO14965 403 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 MAP3K7O43318 606 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 CCNT2O60583 730 aaKnown RBP15.53■□□□□ 0.08
CCDC40-202ENST00000374876 MMP2P08253 660 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 ANPEPP15144 967 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 EPHA3P29320 983 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 SOX9P48436 509 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 NUMBP49757 651 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 FAM83EQ2M2I3 478 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 EML3Q32P44 896 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 SLC44A4Q53GD3 710 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 HTR3DQ70Z44 454 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 DENND1CQ8IV53 801 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 DEFB107AQ8IZN7 70 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 PDCD6IPQ8WUM4 868 aaKnown RBP15.53■□□□□ 0.08
CCDC40-202ENST00000374876 NDNQ99608 321 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 NCKIPSDQ9NZQ3 722 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 CDYLQ9Y232 598 aa15.53■□□□□ 0.08
CCDC40-202ENST00000374876 COL4A3Q01955 1670 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 MYLKQ15746 1914 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 KRBA1A5PL33 1030 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 GRID2O43424 1007 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 FKBP6O75344 327 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 ZMPSTE24O75844 475 aa15.52■□□□□ 0.08
CCDC40-202ENST00000374876 PAPSS2O95340 614 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-202ENST00000374876 ITGAXP20702 1163 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms