RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 VTNP04004 478 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 RSPH10BP0C881 870 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 GHRP10912 638 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 YWHABP31946 246 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 ANP32AP39687 249 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 PRPHP41219 470 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 MRPS6P82932 125 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 PPIGQ13427 754 aaKnown RBP eCLIP4.73□□□□□ -1.656e-7■■□□□ 11.6
PMS1-202ENST00000374826 DRP2Q13474 957 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 CBFBQ13951 182 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 EMC2Q15006 297 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 STK38Q15208 465 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 SHHQ15465 462 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 TCTN1Q2MV58 587 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 ANXA2RQ3ZCQ2 193 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 XKR3Q5GH77 459 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 SPECC1Q5M775 1068 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 IZUMO3Q5VZ72 239 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 ARL6IP4Q66PJ3 421 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 HAUS3Q68CZ6 603 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 LVRNQ6Q4G3 990 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 CATSPER3Q86XQ3 398 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 C4orf19Q8IY42 314 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 RASSF8Q8NHQ8 419 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 THOC3Q96J01 351 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 CEP170P1Q96L14 293 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 SCLT1Q96NL6 688 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 HSD17B14Q9BPX1 270 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 MMTAG2Q9BU76 263 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 RAB34Q9BZG1 259 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 ZSCAN16Q9H4T2 348 aaPredicted RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 CERS4Q9HA82 394 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 TUFT1Q9NNX1 390 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 NECTIN3Q9NQS3 549 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 TM7SF3Q9NS93 570 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 NRBP2Q9NSY0 501 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 DDX19AQ9NUU7 478 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 GEMIN8Q9NWZ8 242 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 IPO11Q9UI26 975 aaKnown RBP4.73□□□□□ -1.65
PMS1-202ENST00000374826 PROCRQ9UNN8 238 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 GINS2Q9Y248 185 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 DTNAQ9Y4J8 743 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 NCOR1O75376 2440 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 MYO10Q9HD67 2058 aa4.73□□□□□ -1.65
PMS1-202ENST00000374826 KDM3AQ9Y4C1 1321 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 CHD7Q9P2D1 2997 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 PTPRDP23468 1912 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 TRBV5-3A0A0A0MS03 114 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 IGLV5-39A0A0G2JS06 123 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 GXYLT2A0PJZ3 443 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 CYSRT1A8MQ03 144 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 E9PMD0 336 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 HNRNPDLO14979 420 aaKnown RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 MAGEB2O15479 319 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 TLX3O43711 291 aaPredicted RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 UGDHO60701 494 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 CAND2O75155 1236 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 ITGA5P08648 1049 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 TNFRSF1BP20333 461 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 RPA1P27694 616 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 CDKN2AP42771 156 aaKnown RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 MGAT3Q09327 533 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 LPIN1Q14693 890 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 GPNMBQ14956 572 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 RAB30Q15771 203 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 MPEG1Q2M385 716 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 KRT79Q5XKE5 535 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 PSRC1Q6PGN9 363 aaPredicted RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 TDHQ8IZJ6 230 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 ARL14EPQ8N8R7 260 aaPredicted RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 LRRC15Q8TF66 581 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 SLC22A17Q8WUG5 538 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 ZFPM2Q8WW38 1151 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 NPIPB3Q92617 1050 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 TMEM143Q96AN5 459 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 FAR2Q96K12 515 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 NLRP4Q96MN2 994 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 ZNF396Q96N95 335 aaPredicted RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 GPR78Q96P69 363 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 MAP7D2Q96T17 732 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 PAAF1Q9BRP4 392 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 POLR3CQ9BUI4 534 aaPredicted RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 PRO3102Q9H379 93 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 DHX33Q9H6R0 707 aaKnown RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 PRDM16Q9HAZ2 1276 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 ERVK-5Q9HDB9 667 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 XPNPEP1Q9NQW7 623 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 FBXO2Q9UK22 296 aaPredicted RBP4.72□□□□□ -1.65
PMS1-202ENST00000374826 PHTF1Q9UMS5 762 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 COG5Q9UP83 839 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 TRPV2Q9Y5S1 764 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 OBSL1O75147 1896 aa4.72□□□□□ -1.65
PMS1-202ENST00000374826 MYO16Q9Y6X6 1858 aa4.71□□□□□ -1.66
PMS1-202ENST00000374826 TRANK1O15050 2925 aa4.71□□□□□ -1.66
PMS1-202ENST00000374826 IGKV6-21A0A0C4DH24 114 aa4.71□□□□□ -1.66
PMS1-202ENST00000374826 ARHGEF35A5YM69 484 aa4.71□□□□□ -1.66
PMS1-202ENST00000374826 ZNF814B7Z6K7 855 aa4.71□□□□□ -1.66
PMS1-202ENST00000374826 SPTLC2O15270 562 aa4.71□□□□□ -1.66
PMS1-202ENST00000374826 CSDE1O75534 798 aaKnown RBP4.71□□□□□ -1.66
PMS1-202ENST00000374826 LYPLA2O95372 231 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms