RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 C6orf203Q9P0P8 240 aaPredicted RBP17.02■□□□□ 0.32
RXRB-201ENST00000374680 CROTQ9UKG9 612 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 COMMD10Q9Y6G5 202 aa17.02■□□□□ 0.32
RXRB-201ENST00000374680 BTN3A1O00481 513 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 UGT3A1Q6NUS8 523 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 FAM117BQ6P1L5 589 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 UGT2A3Q6UWM9 527 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 TAS2R42Q7RTR8 314 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 SIDT2Q8NBJ9 832 aaKnown RBP17.02■□□□□ 0.31
RXRB-201ENST00000374680 MDGA1Q8NFP4 955 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.31
RXRB-201ENST00000374680 SLC29A1Q99808 456 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 CINPQ9BW66 212 aaPredicted RBP17.02■□□□□ 0.31
RXRB-201ENST00000374680 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 LZTS1Q9Y250 596 aa17.02■□□□□ 0.31
RXRB-201ENST00000374680 SAC3D1A6NKF1 404 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 WASH4PA8MWX3 477 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 PRAMEF11O60813 436 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 AOC2O75106 756 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 SLC10A3P09131 477 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 MTHFD2P13995 350 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 ZNF37AP17032 561 aaPredicted RBP17.01■□□□□ 0.31
RXRB-201ENST00000374680 PSMC3P17980 439 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 SQLEQ14534 574 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 C18orf21Q32NC0 220 aaPredicted RBP17.01■□□□□ 0.31
RXRB-201ENST00000374680 FAM45BPQ6NSW5 357 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 LRRC49Q8IUZ0 686 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 SLC22A9Q8IVM8 553 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 HERC6Q8IVU3 1022 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
RXRB-201ENST00000374680 FAM45AQ8TCE6 357 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 CCDC126Q96EE4 140 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 PCDHB7Q9Y5E2 793 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 AKAP10O43572 662 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 CAPN15O75808 1086 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 RPP40O75818 363 aaKnown RBP17.01■□□□□ 0.31
RXRB-201ENST00000374680 BAIAP3O94812 1187 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 CTPS1P17812 591 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 OR1D2P34982 312 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 HERVK_113P63132 956 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 GNA12Q03113 381 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 TWF1Q12792 350 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 PSAPL1Q6NUJ1 521 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 LARP4Q71RC2 724 aaKnown RBP eCLIP17.01■□□□□ 0.31
RXRB-201ENST00000374680 SPPL2CQ8IUH8 684 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 CANT1Q8WVQ1 401 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 CCDC97Q96F63 343 aaPredicted RBP17.01■□□□□ 0.31
RXRB-201ENST00000374680 SCLYQ96I15 445 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
RXRB-201ENST00000374680 ERVK-6Q9BXR3 956 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 MUC3BQ9H195 1237 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 TUBB1Q9H4B7 451 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 ZDHHC7Q9NXF8 308 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 FKBPLQ9UIM3 349 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 LRFN2Q9ULH4 789 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 ASB1Q9Y576 335 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 MYO16Q9Y6X6 1858 aa17.01■□□□□ 0.31
RXRB-201ENST00000374680 A0A1B0GVG6 124 aa17■□□□□ 0.31
RXRB-201ENST00000374680 TBKBP1A7MCY6 615 aa17■□□□□ 0.31
RXRB-201ENST00000374680 AZIN1O14977 448 aa17■□□□□ 0.31
RXRB-201ENST00000374680 ATF6P18850 670 aa17■□□□□ 0.31
RXRB-201ENST00000374680 POLD2P49005 469 aa17■□□□□ 0.31
RXRB-201ENST00000374680 FUT10Q6P4F1 479 aa17■□□□□ 0.31
RXRB-201ENST00000374680 TMCO2Q7Z6W1 182 aaPredicted RBP17■□□□□ 0.31
RXRB-201ENST00000374680 LCA5Q86VQ0 697 aa17■□□□□ 0.31
RXRB-201ENST00000374680 CLYBLQ8N0X4 340 aa17■□□□□ 0.31
RXRB-201ENST00000374680 BRSK1Q8TDC3 778 aa17■□□□□ 0.31
RXRB-201ENST00000374680 STARD7Q9NQZ5 370 aa17■□□□□ 0.31
RXRB-201ENST00000374680 C5orf42Q9H799 3197 aa17■□□□□ 0.31
RXRB-201ENST00000374680 MYO7AQ13402 2215 aa17■□□□□ 0.31
RXRB-201ENST00000374680 C7orf72A4D263 438 aa17■□□□□ 0.31
RXRB-201ENST00000374680 PDLIM1O00151 329 aa17■□□□□ 0.31
RXRB-201ENST00000374680 CASQ2O14958 399 aaPredicted RBP17■□□□□ 0.31
RXRB-201ENST00000374680 BNIP3LO60238 219 aa17■□□□□ 0.31
RXRB-201ENST00000374680 KLKB1P03952 638 aa17■□□□□ 0.31
RXRB-201ENST00000374680 HTR7P34969 479 aa17■□□□□ 0.31
RXRB-201ENST00000374680 RAB44Q7Z6P3 723 aaPredicted RBP17■□□□□ 0.31
RXRB-201ENST00000374680 ARHGAP18Q8N392 663 aa17■□□□□ 0.31
RXRB-201ENST00000374680 FBXO39Q8N4B4 442 aa17■□□□□ 0.31
RXRB-201ENST00000374680 TEX26Q8N6G2 289 aa17■□□□□ 0.31
RXRB-201ENST00000374680 CENPKQ9BS16 269 aa17■□□□□ 0.31
RXRB-201ENST00000374680 UNC93B1Q9H1C4 597 aa17■□□□□ 0.31
RXRB-201ENST00000374680 SPAG4Q9NPE6 437 aa17■□□□□ 0.31
RXRB-201ENST00000374680 EOMESO95936 686 aa17■□□□□ 0.31
RXRB-201ENST00000374680 HOXD9P28356 352 aaPredicted RBP17■□□□□ 0.31
RXRB-201ENST00000374680 OXCT1P55809 520 aa17■□□□□ 0.31
RXRB-201ENST00000374680 BCL7CQ8WUZ0 217 aaPredicted RBP17■□□□□ 0.31
RXRB-201ENST00000374680 TEX37Q96LM6 180 aa17■□□□□ 0.31
RXRB-201ENST00000374680 PPP1R2P1Q96PQ5 205 aa17■□□□□ 0.31
RXRB-201ENST00000374680 SPATA16Q9BXB7 569 aa17■□□□□ 0.31
RXRB-201ENST00000374680 TM6SF2Q9BZW4 377 aa17■□□□□ 0.31
RXRB-201ENST00000374680 ABCG8Q9H221 673 aa17■□□□□ 0.31
RXRB-201ENST00000374680 UBA2Q9UBT2 640 aaPredicted RBP17■□□□□ 0.31
RXRB-201ENST00000374680 USP22Q9UPT9 525 aa17■□□□□ 0.31
RXRB-201ENST00000374680 IGLV3-10A0A075B6K4 115 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 KIF3CO14782 793 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 KATNA1O75449 491 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 ECI2O75521 394 aa16.99■□□□□ 0.31
RXRB-201ENST00000374680 SEC24DO94855 1032 aaPredicted RBP16.99■□□□□ 0.31
RXRB-201ENST00000374680 NCK1P16333 377 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms