RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SLC29A3Q9BZD2 475 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 MTF2Q9Y483 593 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ATXN2Q99700 1313 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 LACTBL1A8MY62 500 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 H3BQF6 201 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ATMINO43313 823 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SGTAO43765 313 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SEC22BO75396 215 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SNAPC5O75971 98 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 LYNP07948 512 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NPTX2P47972 431 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 AP3S2P59780 193 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ELF3P78545 371 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF268Q14587 947 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 KCTD21Q4G0X4 260 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 MFSD7Q6UXD7 560 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ATAD1Q8NBU5 361 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PJA1Q8NG27 643 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 GRPEL2Q8TAA5 225 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ACMSDQ8TDX5 336 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 BBS4Q96RK4 519 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 FAIM2Q9BWQ8 316 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 USP29Q9HBJ7 922 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 MID1IP1Q9NPA3 183 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PRPF19Q9UMS4 504 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF879B4DU55 563 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 H3BNX3 289 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 QSOX1O00391 747 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 GLRBP48167 497 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 AKR1D1P51857 326 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 VBP1P61758 197 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 EIF5AP63241 154 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ABATP80404 500 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 HSF2Q03933 536 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ZNHIT3Q15649 155 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 AGMOQ6ZNB7 445 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 TMC3Q7Z5M5 1100 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 TRAPPC5Q8IUR0 188 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NKAPQ8N5F7 415 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SCAIQ8N9R8 606 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 RP9Q8TA86 221 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 METTL6Q8TCB7 284 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SH3RF2Q8TEC5 729 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NACC2Q96BF6 587 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 HHIPQ96QV1 700 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 TMEM209Q96SK2 561 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CDRT15Q96T59 188 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 GRIP2Q9C0E4 1043 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NXF3Q9H4D5 531 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CYP4F12Q9HCS2 524 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CLIC5Q9NZA1 410 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 KIAA1522Q9P206 1035 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PSME2Q9UL46 239 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SSR3Q9UNL2 185 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SQORQ9Y6N5 450 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NCF1BA6NI72 391 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NCF1CA8MVU1 366 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CCNT2O60583 730 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 TLR5O60602 858 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NCF1P14598 390 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CD72P21854 359 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SERPINA4P29622 427 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PBX2P40425 430 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 OMPP47874 163 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 RFX3P48380 749 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 DEFB103AP81534 67 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 GALNT3Q14435 633 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 VARS2Q5ST30 1063 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF549Q6P9A3 640 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 MTMR8Q96EF0 704 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PPP3R2Q96LZ3 170 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 TCF12Q99081 682 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 R3HDMLQ9H3Y0 253 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 FAM124BQ9H5Z6 455 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CAB39LQ9H9S4 337 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PHPT1Q9NRX4 125 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 GMPPBQ9Y5P6 360 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ZFP37Q9Y6Q3 630 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 A0A096LPK6 155 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 TMCC2O75069 709 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SOD2P04179 222 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NR2F6P10588 404 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 DGKAP23743 735 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 GJA5P36382 358 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CLK3P49761 638 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CDK9P50750 372 aaKnown RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PDK3Q15120 406 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 FBXO43Q4G163 708 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ARMC8Q8IUR7 673 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ASB7Q9H672 318 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF232Q9UNY5 417 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 BAIAP2Q9UQB8 552 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 NHSL1Q5SYE7 1610 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 BBIP1A8MTZ0 92 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 HIST1H2ABP04908 130 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 OR4Q2P0C623 313 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 COL6A1P12109 1028 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ALAS2P22557 587 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms