RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ADORA2BP29275 332 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 CYP4F8P98187 520 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 STILQ15468 1287 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 TIGD6Q17RP2 521 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 PIGGQ5H8A4 983 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 SLC41A1Q8IVJ1 513 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 LRRC71Q8N4P6 559 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 OR13J1Q8NGT2 312 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 CD101Q93033 1021 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 RIT2Q99578 217 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 MRPL57Q9BQC6 102 aaKnown RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 NECTIN3Q9NQS3 549 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 ADGRE2Q9UHX3 823 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 MYH15Q9Y2K3 1946 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 KCNK1O00180 336 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 PMPCBO75439 489 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 TNNI3P19429 210 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 PSMA1P25786 263 aaKnown RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 PKLRP30613 574 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 ATP6V0D1P61421 351 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 TMEM179Q6ZVK1 233 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 LYSMD3Q7Z3D4 306 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 CCDC36Q8IYA8 594 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 OR52K1Q8NGK4 314 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 UPF1Q92900 1129 aaKnown RBP eCLIP10.23□□□□□ -0.77
CD28-202ENST00000374481 ERMAPQ96PL5 475 aaPredicted RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 TBCBQ99426 244 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 SMAD5Q99717 465 aaKnown RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 TARS2Q9BW92 718 aaKnown RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 MRPL4Q9BYD3 311 aaKnown RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 DPY30Q9C005 99 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 CRISPLD1Q9H336 500 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 CDHR5Q9HBB8 845 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 KCNH4Q9UQ05 1017 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 RIMS1Q86UR5 1692 aaKnown RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 ARPC2O15144 300 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 PGK2P07205 417 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 ADRB2P07550 413 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 SREBF1P36956 1147 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 DSTNP60981 165 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 IL18Q14116 193 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 GALEQ14376 348 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 C6orf141Q5SZD1 244 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 HYIQ5T013 277 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 CHMP1BQ7LBR1 199 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 DENND6AQ8IWF6 608 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 UNC5BQ8IZJ1 945 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 ZDHHC14Q8IZN3 488 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 CPSF7Q8N684 471 aaKnown RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 ANKFN1Q8N957 763 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 OR2T12Q8NG77 320 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 TFAP2CQ92754 450 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 CPB2Q96IY4 423 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 FAM83DQ9H4H8 585 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 FANCFQ9NPI8 374 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 NFKBIL1Q9UBC1 381 aaPredicted RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 MFHAS1Q9Y4C4 1052 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 A0A0A0MRY4 1105 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 H0YAE9 185 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 PGRP06401 933 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 C7P10643 843 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 IMPDH1P20839 514 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 ACO1P21399 889 aaKnown RBP10.23□□□□□ -0.77
CD28-202ENST00000374481 GSTM2P28161 218 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 POU6F1Q14863 301 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 NOMO1Q15155 1222 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 ANKS6Q68DC2 871 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 TIGD4Q8IY51 512 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 GRIN3AQ8TCU5 1115 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 GTF2H4Q92759 462 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 SPATA13Q96N96 652 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 SIK2Q9H0K1 926 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 PCDHB16Q9NRJ7 776 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 AXIN2Q9Y2T1 843 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 PCDHA10Q9Y5I2 948 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 TLL2Q9Y6L7 1015 aa10.23□□□□□ -0.77
CD28-202ENST00000374481 ACOX3O15254 700 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 AP2A2O94973 939 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SLITRK5O94991 958 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 PLATP00750 562 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 TCF4P15884 667 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 WARSP23381 471 aaKnown RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 AKAP5P24588 427 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 NR2C2P49116 596 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ALDH3A2P51648 485 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ATN1P54259 1190 aaPredicted RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 MXD1Q05195 221 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 RPA4Q13156 261 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 PGM2L1Q6PCE3 622 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SLC37A3Q8NCC5 494 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SLC35B2Q8TB61 432 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 CELF1Q92879 486 aaKnown RBP10.22□□□□□ -0.77
CD28-202ENST00000374481 TMBIM1Q969X1 311 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 TPD52L3Q96J77 140 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 SLC45A3Q96JT2 553 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 PPM1MQ96MI6 270 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 ZNRF3Q9ULT6 936 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 LYVE1Q9Y5Y7 322 aa10.22□□□□□ -0.77
CD28-202ENST00000374481 C7orf72A4D263 438 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms