RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 B3GALT1Q9Y5Z6 326 aa13.75□□□□□ -0.21
CXCL12-202ENST00000374426 PGLSO95336 258 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 CYP2A6P11509 494 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-202ENST00000374426 TCF4P15884 667 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 CDK11BP21127 795 aaKnown RBP13.74□□□□□ -0.21
CXCL12-202ENST00000374426 AMPD1P23109 780 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 ACTR1BP42025 376 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 ATP1A2P50993 1020 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 ACTR1AP61163 376 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 MAXP61244 160 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 DPTQ07507 201 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 DPYSL2Q16555 572 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 DOK6Q6PKX4 331 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 RFLNAQ6ZTI6 216 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 POLNQ7Z5Q5 900 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 DDA1Q9BW61 102 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 CDH19Q9H159 772 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 CNOT8Q9UFF9 292 aaKnown RBP13.74□□□□□ -0.21
CXCL12-202ENST00000374426 MYO6Q9UM54 1294 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 PPIL1Q9Y3C6 166 aa13.74□□□□□ -0.21
CXCL12-202ENST00000374426 USP9YO00507 2555 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-202ENST00000374426 LRRC53A6NM62 1247 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 H3BRJ5 948 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 FTLP02792 175 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-202ENST00000374426 LIFP15018 202 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 CTPS1P17812 591 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 NFKBIAP25963 317 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 CSTF2P33240 577 aaKnown RBP eCLIP13.73□□□□□ -0.21
CXCL12-202ENST00000374426 PCK1P35558 622 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 PEX6Q13608 980 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 E4F1Q66K89 784 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-202ENST00000374426 BORAQ6PGQ7 559 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 TMCO3Q6UWJ1 677 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 ADAMTSL4Q6UY14 1074 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 CLEC17AQ6ZS10 378 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 USP45Q70EL2 814 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 ZNF571Q7Z3V5 609 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-202ENST00000374426 TRIM74Q86UV6 250 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 IL22RA1Q8N6P7 574 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 CCDC112Q8NEF3 446 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 PIH1D2Q8WWB5 315 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 CSPG4P5Q96PW8 444 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 SMIM14Q96QK8 99 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 OR2M4Q96R27 311 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 ADNPQ9H2P0 1102 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 ANO10Q9NW15 660 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 OCIAD1Q9NX40 245 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 KCNK4Q9NYG8 393 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 CD84Q9UIB8 345 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 TMEM98Q9Y2Y6 226 aa13.73□□□□□ -0.21
CXCL12-202ENST00000374426 SPENQ96T58 3664 aaKnown RBP13.73□□□□□ -0.21
CXCL12-202ENST00000374426 USP9XQ93008 2570 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-202ENST00000374426 B4E171 279 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 DDX3XO00571 662 aaKnown RBP eCLIP13.72□□□□□ -0.21
CXCL12-202ENST00000374426 PDHA1P08559 390 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 GZMAP12544 262 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 ARL4AP40617 200 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 TSPAN7P41732 249 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 MMP13P45452 471 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 GPR1P46091 355 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 FASLGP48023 281 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 GPLD1P80108 840 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 TLE1Q04724 770 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 STX1AQ16623 288 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 PYCR3Q53H96 274 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 RALGPS1Q5JS13 557 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 ARMC12Q5T9G4 340 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 MARC1Q5VT66 337 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 LRRC66Q68CR7 880 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 TMEM71Q6P5X7 295 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 SASS6Q6UVJ0 657 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 ZNF761Q86XN6 746 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-202ENST00000374426 CACNA2D3Q8IZS8 1091 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 BBS5Q8N3I7 341 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 ATPAF2Q8N5M1 289 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 BMPERQ8N8U9 685 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 SLC37A2Q8TED4 501 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 SCAMP4Q969E2 229 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 ZNF653Q96CK0 615 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 AP2M1Q96CW1 435 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 DPYSL5Q9BPU6 564 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 ASPSCR1Q9BZE9 553 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 ABCG8Q9H221 673 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.72□□□□□ -0.21
CXCL12-202ENST00000374426 SLC39A1Q9NY26 324 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 PDP2Q9P2J9 529 aa13.72□□□□□ -0.21
CXCL12-202ENST00000374426 SPTAN1Q13813 2472 aaKnown RBP13.71□□□□□ -0.21
CXCL12-202ENST00000374426 TRBV23OR9-2A0A075B6M9 112 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 EFCAB7A8K855 629 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 FZD6O60353 706 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 RAD1O60671 282 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 EML2O95834 649 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 CDH6P55285 790 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 POLE2P56282 527 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 PTSQ03393 145 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 SRSF1Q07955 248 aaKnown RBP eCLIP13.71□□□□□ -0.21
CXCL12-202ENST00000374426 KCNAB2Q13303 367 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 ASIC2Q16515 512 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms