RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 TIFABQ6ZNK6 161 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CLDN19Q8N6F1 224 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 BRSK1Q8TDC3 778 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CDKN2AIPNLQ96HQ2 116 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 PANX3Q96QZ0 392 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 DHRS4Q9BTZ2 278 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 OPTCQ9UBM4 332 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 AP4S1Q9Y587 144 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 ZNF197O14709 1029 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CPSF4O95639 269 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 PGFP49763 221 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 STARD3Q14849 445 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 PABPC1LQ4VXU2 614 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 AP1ARQ63HQ0 302 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 IRGCQ6NXR0 463 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 TTC33Q6PID6 262 aaPredicted RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 EFL1Q7Z2Z2 1120 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 NKAPQ8N5F7 415 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 SMIM14Q96QK8 99 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 RTKNQ9BST9 563 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 BBS2Q9BXC9 721 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CCL16O15467 120 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 SLC7A4O43246 635 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 NRP2O60462 931 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 WFS1O76024 890 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 MYO1DO94832 1006 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 SORBS2O94875 1100 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CXCL14O95715 111 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CLPTM1O96005 669 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 RPL38P63173 70 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CREB5Q02930 508 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 ARHGAP15Q53QZ3 475 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 SAMD4BQ5PRF9 694 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 KIAA0408Q6ZU52 694 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 STYXQ8WUJ0 223 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 TWIST2Q8WVJ9 160 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 UTP4Q969X6 686 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 ZNF570Q96NI8 536 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 DPY30Q9C005 99 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 EIF2B4Q9UI10 523 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 DOCK3Q8IZD9 2030 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 FAM149AA5PLN7 773 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 LRRC14BA6NHZ5 514 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 NEDD8-MDP1E9PL57 170 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 PIP5K1BO14986 540 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 LZTS3O60299 673 aaPredicted RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 SLC35E2BP0CK96 405 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 ETS2P15036 469 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CES1P23141 567 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 SQLEQ14534 574 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CACHD1Q5VU97 1274 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 PLPP4Q5VZY2 271 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 DNAJB7Q7Z6W7 309 aaPredicted RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 MAPK15Q8TD08 544 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 KCNA7Q96RP8 456 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 SMG9Q9H0W8 520 aaKnown RBP13.53□□□□□ -0.24
CLIC4-201ENST00000374379 MAGEH1Q9H213 219 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 SPAG4Q9NPE6 437 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CLIC5Q9NZA1 410 aa13.53□□□□□ -0.24
CLIC4-201ENST00000374379 CNTRLQ7Z7A1 2325 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 TIPRLO75663 272 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 CNPP09543 421 aaKnown RBP13.52□□□□□ -0.24
CLIC4-201ENST00000374379 PAX3P23760 479 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 THOP1P52888 689 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 LRRC74AQ0VAA2 488 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 SCAPQ12770 1279 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 PPP1R3AQ16821 1122 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 RNF220Q5VTB9 566 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 GPRIN3Q6ZVF9 776 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 C11orf96Q7Z7L8 435 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 HJURPQ8NCD3 748 aaPredicted RBP13.52□□□□□ -0.24
CLIC4-201ENST00000374379 PTCD2Q8WV60 388 aaKnown RBP13.52□□□□□ -0.24
CLIC4-201ENST00000374379 MIEF2Q96C03 454 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 FOPNLQ96NB1 174 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 ZFYVE1Q9HBF4 777 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 POLR3BQ9NW08 1133 aaPredicted RBP13.52□□□□□ -0.24
CLIC4-201ENST00000374379 SPASTQ9UBP0 616 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 PCDHGB4Q9UN71 923 aa13.52□□□□□ -0.24
CLIC4-201ENST00000374379 SYNDIG1LA6NDD5 238 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 TMCC1O94876 653 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 SLC25A14O95258 325 aaPredicted RBP13.52□□□□□ -0.25
CLIC4-201ENST00000374379 PRAMEF1O95521 474 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 GALTP07902 379 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 HSPA1AP0DMV8 641 aaKnown RBP13.52□□□□□ -0.25
CLIC4-201ENST00000374379 HSPA1BP0DMV9 641 aaKnown RBP13.52□□□□□ -0.25
CLIC4-201ENST00000374379 XRCC1P18887 633 aaPredicted RBP13.52□□□□□ -0.25
CLIC4-201ENST00000374379 CCNFP41002 786 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 GPR17Q13304 367 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 SLC44A2Q8IWA5 706 aaPredicted RBP13.52□□□□□ -0.25
CLIC4-201ENST00000374379 RNF217Q8TC41 542 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 PDP2Q9P2J9 529 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 PRMT5O14744 637 aaPredicted RBP13.52□□□□□ -0.25
CLIC4-201ENST00000374379 ITGAXP20702 1163 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 GGT5P36269 586 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 HSPA7P48741 367 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 CDH4P55283 916 aa13.52□□□□□ -0.25
CLIC4-201ENST00000374379 ACAP2Q15057 778 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms