RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 MID1IP1Q9NPA3 183 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 AGPAT4Q9NRZ5 378 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 CMTM6Q9NX76 183 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 RSL24D1Q9UHA3 163 aaKnown RBP12.73□□□□□ -0.37
CTPS1-202ENST00000372621 CHD5Q8TDI0 1954 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 CD3EAPO15446 510 aaKnown RBP12.73□□□□□ -0.37
CTPS1-202ENST00000372621 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
CTPS1-202ENST00000372621 SLC6A2P23975 617 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 CDK9P50750 372 aaKnown RBP12.73□□□□□ -0.37
CTPS1-202ENST00000372621 TBX4P57082 545 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 KIF19Q2TAC6 998 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 LRRC23Q53EV4 343 aaPredicted RBP12.73□□□□□ -0.37
CTPS1-202ENST00000372621 IGSF8Q969P0 613 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 CAAP1Q9H8G2 361 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 ARL5AQ9Y689 179 aa12.73□□□□□ -0.37
CTPS1-202ENST00000372621 CROCCQ5TZA2 2017 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 TRIM64A6NGJ6 449 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 HNRNPRO43390 633 aaKnown RBP12.72□□□□□ -0.37
CTPS1-202ENST00000372621 AKAP10O43572 662 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 BMP10O95393 424 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 GLP2RO95838 553 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 SLC4A1P02730 911 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 NME5P56597 212 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 YWHAHQ04917 246 aaPredicted RBP12.72□□□□□ -0.37
CTPS1-202ENST00000372621 PTPRCAPQ14761 206 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 SLC39A12Q504Y0 691 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 COQ5Q5HYK3 327 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 FAM81AQ8TBF8 368 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 KCNA7Q96RP8 456 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 MTG1Q9BT17 334 aaPredicted RBP12.72□□□□□ -0.37
CTPS1-202ENST00000372621 TFB2MQ9H5Q4 396 aaKnown RBP12.72□□□□□ -0.37
CTPS1-202ENST00000372621 CLK4Q9HAZ1 481 aaKnown RBP12.72□□□□□ -0.37
CTPS1-202ENST00000372621 ACTR3BQ9P1U1 418 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 A0A1B0GTL3 188 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 HPCAP84074 193 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 IL10RBQ08334 325 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 BNIP2Q12982 314 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 BTG3Q14201 252 aaPredicted RBP12.72□□□□□ -0.37
CTPS1-202ENST00000372621 PFKFB4Q16877 469 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 KRT80Q6KB66 452 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 CXCL17Q6UXB2 119 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 FEM1CQ96JP0 617 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 SLC45A3Q96JT2 553 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTPS1-202ENST00000372621 POLG2Q9UHN1 485 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 SLC8A2Q9UPR5 921 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 PCDHA9Q9Y5H5 950 aa12.72□□□□□ -0.37
CTPS1-202ENST00000372621 ZFC3H1O60293 1989 aaKnown RBP12.72□□□□□ -0.37
CTPS1-202ENST00000372621 DHRS12A0PJE2 317 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 CCDC162PA2VCL2 907 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 DRGXA6NNA5 263 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 MUSKO15146 869 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 KPNA6O60684 536 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 STAMBPO95630 424 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 MRPL19P49406 292 aaKnown RBP12.71□□□□□ -0.37
CTPS1-202ENST00000372621 GPR15P49685 360 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 TYSND1Q2T9J0 566 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 MAP7D1Q3KQU3 841 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 SPATS1Q496A3 300 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 SETMARQ53H47 684 aaPredicted RBP12.71□□□□□ -0.37
CTPS1-202ENST00000372621 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 FBXL22Q6P050 247 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 BLOC1S3Q6QNY0 202 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 SPPL2CQ8IUH8 684 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 ERI1Q8IV48 349 aaKnown RBP12.71□□□□□ -0.37
CTPS1-202ENST00000372621 SCN4BQ8IWT1 228 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 GAB3Q8WWW8 586 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 EXT2Q93063 718 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 LRRC58Q96CX6 371 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 IL1RL2Q9HB29 575 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 SMOXQ9NWM0 555 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 DUSP11O75319 330 aaKnown RBP12.71□□□□□ -0.37
CTPS1-202ENST00000372621 RPP40O75818 363 aaKnown RBP12.71□□□□□ -0.37
CTPS1-202ENST00000372621 PRR35P0CG20 571 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 PBX3P40426 434 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 ZFP36L2P47974 494 aaKnown RBP12.71□□□□□ -0.37
CTPS1-202ENST00000372621 FKBP1BP68106 108 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 FOXM1Q08050 763 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 SERINC3Q13530 473 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 TBCELQ5QJ74 424 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 MRNIPQ6NTE8 343 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 CAMK1DQ8IU85 385 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 CBR4Q8N4T8 237 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 FAM47BQ8NA70 645 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 TRPV1Q8NER1 839 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 ADAMTS16Q8TE57 1224 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.71□□□□□ -0.373e-9■■■■■ 78.5
CTPS1-202ENST00000372621 MYRFLQ96LU7 910 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 AARSD1Q9BTE6 412 aaKnown RBP12.71□□□□□ -0.37
CTPS1-202ENST00000372621 MED16Q9Y2X0 877 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 GPR45Q9Y5Y3 372 aa12.71□□□□□ -0.37
CTPS1-202ENST00000372621 ANGPT2O15123 496 aa12.71□□□□□ -0.38
CTPS1-202ENST00000372621 B4GALT3O60512 393 aa12.71□□□□□ -0.38
CTPS1-202ENST00000372621 CLASP2O75122 1294 aaKnown RBP12.71□□□□□ -0.38
CTPS1-202ENST00000372621 GNAO1P09471 354 aa12.71□□□□□ -0.38
CTPS1-202ENST00000372621 AKR1A1P14550 325 aa12.71□□□□□ -0.38
CTPS1-202ENST00000372621 LBPP18428 481 aa12.71□□□□□ -0.38
CTPS1-202ENST00000372621 HLA-DPA1P20036 260 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms