RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 B3GALNT1O75752 331 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 RECQL5O94762 991 aaPredicted RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 VAPBO95292 243 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 STATHP02808 62 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 EIF2S1P05198 315 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 HLA-DQB2P05538 268 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 FCARP24071 287 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 AK4P27144 223 aaPredicted RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 CTNNA1P35221 906 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 HNF4AP41235 474 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 NEK3P51956 506 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 PGGT1BP53609 377 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ETF1P62495 437 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 BCL2A1Q16548 175 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 LONRF1Q17RB8 773 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 SYTL3Q4VX76 610 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 PHF19Q5T6S3 580 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 LYSMD3Q7Z3D4 306 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 SLC13A5Q86YT5 568 aaPredicted RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 WDR75Q8IWA0 830 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 ZC3H3Q8IXZ2 948 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 ZBED8Q8IZ13 594 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ARFGAP1Q8N6T3 406 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 BEND7Q8N7W2 519 aaPredicted RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 LMNTD1Q8N9Z9 388 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 CCT6BQ92526 530 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 SYN2Q92777 582 aaPredicted RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 ERP27Q96DN0 273 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 MYO19Q96H55 970 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 EDEM2Q9BV94 578 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 RIOK2Q9BVS4 552 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 ADGRE3Q9BY15 652 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 SLC13A1Q9BZW2 595 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 SAYSD1Q9NPB0 183 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 PCDH12Q9NPG4 1184 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 EPS15L1Q9UBC2 864 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 EFR3BQ9Y2G0 817 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ANKRD12Q6UB98 2062 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ILVBLA1L0T0 632 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 CCDC151A5D8V7 595 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 POM121BA6NF01 834 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 CACNB4O00305 520 aaPredicted RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 FGF10O15520 208 aaPredicted RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 LMNAP02545 664 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 CYP1A2P05177 515 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 PBX1P40424 430 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 DR1Q01658 176 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 BNIP3Q12983 259 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ZBTB17Q13105 803 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 TEAD4Q15561 434 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 UGP2Q16851 508 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 HNRNPA1L2Q32P51 320 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 WDR45BQ5MNZ6 344 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ZCCHC8Q6NZY4 707 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 CNSTQ6PJW8 725 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ERN2Q76MJ5 926 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 ZDHHC14Q8IZN3 488 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 PPM1NQ8N819 430 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ARHGEF2Q92974 986 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 BIRC7Q96CA5 298 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 HAPLN3Q96S86 360 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 PCDH9Q9HC56 1237 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 NDOR1Q9UHB4 597 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ZMYM5Q9UJ78 669 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 MMP17Q9ULZ9 603 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 SMG5Q9UPR3 1016 aaKnown RBP7.04□□□□□ -1.28
USP1-202ENST00000371146 SH3GLB1Q9Y371 365 aa7.04□□□□□ -1.28
USP1-202ENST00000371146 ZNF462Q96JM2 2506 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 SDK2Q58EX2 2172 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 C2orf81A6NN90 581 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 MIF4GDA9UHW6 222 aaKnown RBP7.03□□□□□ -1.28
USP1-202ENST00000371146 BCAT2O15382 392 aaPredicted RBP7.03□□□□□ -1.28
USP1-202ENST00000371146 HRO43593 1189 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 GPR37L1O60883 481 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 JUNDP17535 347 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 CD6P30203 668 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 MPLP40238 635 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 PEX5P50542 639 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 CDK18Q07002 472 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 FCHO2Q0JRZ9 810 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 SLC10A2Q12908 348 aaPredicted RBP7.03□□□□□ -1.28
USP1-202ENST00000371146 PDIA2Q13087 525 aaKnown RBP7.03□□□□□ -1.28
USP1-202ENST00000371146 ANKRD20A2Q5SQ80 823 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 ANKRD20A1Q5TYW2 823 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 ANKRD20A3Q5VUR7 823 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 NEPROQ6NW34 567 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 OR2T3Q8NH03 318 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 OVCA2Q8WZ82 227 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP1-202ENST00000371146 ARRDC3Q96B67 414 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 CAMK1GQ96NX5 476 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 SLC2A13Q96QE2 648 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 KLF6Q99612 283 aaPredicted RBP7.03□□□□□ -1.28
USP1-202ENST00000371146 CLK4Q9HAZ1 481 aaKnown RBP7.03□□□□□ -1.28
USP1-202ENST00000371146 ZFYVE1Q9HBF4 777 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 RXFP3Q9NSD7 469 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 FAM153AQ9UHL3 310 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 ARL5AQ9Y689 179 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 MYH15Q9Y2K3 1946 aa7.03□□□□□ -1.28
USP1-202ENST00000371146 LRRC37A2A6NM11 1700 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms