RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 STYXQ8WUJ0 223 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 KLHDC7BQ96G42 594 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 BMFQ96LC9 184 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 SERPINB12Q96P63 405 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 LRRC1Q9BTT6 524 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 ZSCAN5AQ9BUG6 496 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 CD84Q9UIB8 345 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 ANAPC5Q9UJX4 755 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 RIMKLBQ9ULI2 386 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 SLC6A14Q9UN76 642 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 SNX24Q9Y343 169 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 SLCO1B1Q9Y6L6 691 aa15.49■□□□□ 0.07
PRPF38B-202ENST00000370022 MAGEB16A2A368 324 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 POM121BA6NF01 834 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 KHNYNO15037 678 aaKnown RBP15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 HOXC4P09017 264 aaPredicted RBP15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 PSMA3P25788 255 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 SPAM1P38567 509 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 MAGEA3P43357 314 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 ZNF140P52738 457 aaPredicted RBP15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 ITGA8P53708 1063 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 C21orf59P57076 290 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 CLDN2P57739 230 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 MRPS25P82663 173 aaKnown RBP15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 CAV1Q03135 178 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 SEPT6Q14141 434 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 SKIDA1Q1XH10 827 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 TRIM61Q5EBN2 209 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 RAET1GQ6H3X3 334 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 TRAM1L1Q8N609 369 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 NOA1Q8NC60 698 aaKnown RBP15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 GPR26Q8NDV2 337 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 OR4K2Q8NGD2 314 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 SCAMP4Q969E2 229 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 RIOK2Q9BVS4 552 aaKnown RBP15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 NUSAP1Q9BXS6 441 aaKnown RBP15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 ZDHHC5Q9C0B5 715 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 ZMYND15Q9H091 742 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 MRM3Q9HC36 420 aaKnown RBP15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 CAPN10Q9HC96 672 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 BPIFA1Q9NP55 256 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 GPR27Q9NS67 375 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 APPL1Q9UKG1 709 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 TCAF1Q9Y4C2 921 aa15.48■□□□□ 0.07
PRPF38B-202ENST00000370022 SDR42E2A6NKP2 422 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 GOLGA8CPA6NN73 597 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 H0Y8X5 98 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 GOLGA8MH3BSY2 632 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 TLR4O00206 839 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 CFIP05156 583 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 ZNF806P0C7X5 589 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 THEGLP0DJG4 465 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 GPR1P46091 355 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 CSNK1EP49674 416 aaKnown RBP15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 PTK2BQ14289 1009 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 ADAMTSL4Q6UY14 1074 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 Q6ZSR6 202 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 RFLNAQ6ZTI6 216 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 PTAR1Q7Z6K3 402 aaPredicted RBP15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 PDIK1LQ8N165 341 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 SEC14L1Q92503 715 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 TEX101Q9BY14 249 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 DPH5Q9H2P9 285 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 WDR26Q9H7D7 661 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 IL26Q9NPH9 171 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 NLE1Q9NVX2 485 aaPredicted RBP15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 CA5BQ9Y2D0 317 aa15.47■□□□□ 0.07
PRPF38B-202ENST00000370022 PLXNA2O75051 1894 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 GLYATL1P3A0A0U1RQE8 302 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 H7C0S8 307 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 CACNB4O00305 520 aaPredicted RBP15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 BUD23O43709 281 aaKnown RBP15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 WNT1P04628 370 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 SYPP08247 313 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 MGAT1P26572 445 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 HTR1BP28222 390 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 THOP1P52888 689 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 ITGA9Q13797 1035 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 CSRP2Q16527 193 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 DNAJC21Q5F1R6 531 aaKnown RBP15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 TSTD2Q5T7W7 516 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 IL27RAQ6UWB1 636 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 ALYREFQ86V81 257 aaKnown RBP15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 GPR161Q8N6U8 529 aaKnown RBP15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 PLA2G15Q8NCC3 412 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 OR13H1Q8NG92 308 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 APOOQ9BUR5 198 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 KIFC1Q9BW19 673 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 SPATA16Q9BXB7 569 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 SAMD15Q9P1V8 674 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 ANKRD6Q9Y2G4 727 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 LRRK1Q38SD2 2015 aa15.46■□□□□ 0.07
PRPF38B-202ENST00000370022 K7ESM1 405 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 TP73O15350 636 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 AVILO75366 819 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 SOD1P00441 154 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 MYCLP1P12525 358 aaPredicted RBP15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 KELP23276 732 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 NXPH1P58417 271 aa15.45■□□□□ 0.06
PRPF38B-202ENST00000370022 KIAA1024LP59773 190 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms