RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TULP3O75386 442 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 ADCYAP1R1P41586 468 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 GRM5P41594 1212 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 HSPA14Q0VDF9 509 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 UNC5BQ8IZJ1 945 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 RTL3Q8N8U3 475 aaKnown RBP15.9■□□□□ 0.14
COL17A1-202ENST00000369733 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
COL17A1-202ENST00000369733 TMPRSS4Q9NRS4 437 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 SPACA6W5XKT8 324 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
COL17A1-202ENST00000369733 IGSF6O95976 241 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 FGF1P05230 155 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 POU5F1Q01860 360 aaKnown RBP15.89■□□□□ 0.13
COL17A1-202ENST00000369733 IL18R1Q13478 541 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 ZNF460Q14592 562 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 ACAP2Q15057 778 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 ZBED5Q49AG3 693 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 SDE2Q6IQ49 451 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 PYROXD2Q8N2H3 581 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 MPP5Q8N3R9 675 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 IFT80Q9P2H3 777 aaPredicted RBP15.89■□□□□ 0.13
COL17A1-202ENST00000369733 VPS4AQ9UN37 437 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 TOR1BO14657 336 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 SSNA1O43805 119 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 NDUFS2O75306 463 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 TCF4P15884 667 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 TMEM214Q6NUQ4 689 aaKnown RBP15.89■□□□□ 0.13
COL17A1-202ENST00000369733 ARMC8Q8IUR7 673 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 GLIS1Q8NBF1 620 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 CERKQ8TCT0 537 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 CITED4Q96RK1 184 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 SMPD4Q9NXE4 827 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 SLC17A6Q9P2U8 582 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 TSPAN9O75954 239 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 FARP2O94887 1054 aaPredicted RBP15.89■□□□□ 0.13
COL17A1-202ENST00000369733 TPTEP56180 551 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 ENPEPQ07075 957 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 DGKZQ13574 1117 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 PDCD4Q53EL6 469 aaKnown RBP15.89■□□□□ 0.13
COL17A1-202ENST00000369733 TMEM198Q66K66 360 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 FRMD7Q6ZUT3 714 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 EGFL6Q8IUX8 553 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 HEXDCQ8WVB3 486 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 NDRG1Q92597 394 aaKnown RBP15.89■□□□□ 0.13
COL17A1-202ENST00000369733 ASB9Q96DX5 294 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 HSPBAP1Q96EW2 488 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 ELOVL7A1L3X0 281 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 UGT1A6P19224 532 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 UGT1A1P22309 533 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 UGT1A4P22310 534 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 UGT1A3P35503 534 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 UGT1A5P35504 534 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 IRF9Q00978 393 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 HERC3Q15034 1050 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 FAM43BQ6ZT52 329 aaPredicted RBP15.89■□□□□ 0.13
COL17A1-202ENST00000369733 CLHC1Q8NHS4 586 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 KLHL5Q96PQ7 755 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 BBS4Q96RK4 519 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 ZNF358Q9NW07 568 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 PPP2R3BQ9Y5P8 575 aa15.89■□□□□ 0.13
COL17A1-202ENST00000369733 PLOD3O60568 738 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 CKMT2P17540 419 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 PTPN9P43378 593 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 AP5B1Q2VPB7 878 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 RIOX2Q8IUF8 465 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 EIF2B3Q9NR50 452 aaKnown RBP15.88■□□□□ 0.13
COL17A1-202ENST00000369733 SPEF2Q9C093 1822 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 CDH15P55291 814 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 MACC1Q6ZN28 852 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 AHSA2Q719I0 299 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 IZUMO1Q8IYV9 350 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 FCRL2Q96LA5 508 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-202ENST00000369733 FZD1Q9UP38 647 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 KCNH4Q9UQ05 1017 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 CNTN6Q9UQ52 1028 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 MRPS7Q9Y2R9 242 aaKnown RBP15.88■□□□□ 0.13
COL17A1-202ENST00000369733 LYVE1Q9Y5Y7 322 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 ARF4P18085 180 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-202ENST00000369733 LPOP22079 712 aaPredicted RBP15.88■□□□□ 0.13
COL17A1-202ENST00000369733 SCNN1GP51170 649 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 SLC18A2Q05940 514 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 C1orf127Q8N9H9 656 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 C7orf43Q8WVR3 580 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 NLNQ9BYT8 704 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 PTGFRNQ9P2B2 879 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 ALDH4A1P30038 563 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 NRLP54845 237 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 UGT2B15P54855 530 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 TMEM132BQ14DG7 1078 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 FAM171A1Q5VUB5 890 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 GATAD2AQ86YP4 633 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 PIH1D2Q8WWB5 315 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 TCAF1Q9Y4C2 921 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 EI24O14681 340 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 OR10H3O60404 316 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
COL17A1-202ENST00000369733 VNN1O95497 513 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 ADORA2AP29274 412 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 MSS51Q4VC12 460 aa15.88■□□□□ 0.13
COL17A1-202ENST00000369733 ARHGAP15Q53QZ3 475 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms