RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 TMEM233B4DJY2 109 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 UBDO15205 165 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 GPC4O75487 556 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 GJB3O75712 270 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 KLKB1P03952 638 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 RB1P06400 928 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 ZNF37AP17032 561 aaPredicted RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 CD9P21926 228 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 ATP6V0D1P61421 351 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 CYTH1Q15438 398 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 SPOUT1Q5T280 376 aaKnown RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 ZNF697Q5TEC3 545 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 TMEM198Q66K66 360 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 CLYBLQ8N0X4 340 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 OR52K2Q8NGK3 314 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 PRICKLE1Q96MT3 831 aaPredicted RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 CLSTN3Q9BQT9 956 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 KLF16Q9BXK1 252 aaPredicted RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 TDRD1Q9BXT4 1180 aaKnown RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 MRPL1Q9BYD6 325 aaKnown RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 CCDC68Q9H2F9 335 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 TAS2R13Q9NYV9 303 aa13.14□□□□□ -0.31
ECM1-202ENST00000369047 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 G3BP2Q9UN86 482 aaKnown RBP13.14□□□□□ -0.31
ECM1-202ENST00000369047 SUPT7LO94864 414 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 CA3P07451 260 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 LPOP22079 712 aaPredicted RBP13.13□□□□□ -0.31
ECM1-202ENST00000369047 KCNC1P48547 511 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 ATP4BP51164 291 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 IRX1P78414 480 aaPredicted RBP13.13□□□□□ -0.31
ECM1-202ENST00000369047 TIAL1Q01085 375 aaKnown RBP eCLIP13.13□□□□□ -0.31
ECM1-202ENST00000369047 PEX6Q13608 980 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 VEPH1Q14D04 833 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 PIGGQ5H8A4 983 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 GLT6D1Q7Z4J2 308 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 STAG3L4Q8TBR4 150 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 CCDC124Q96CT7 223 aaKnown RBP13.13□□□□□ -0.31
ECM1-202ENST00000369047 RCN3Q96D15 328 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 NR1H4Q96RI1 486 aaPredicted RBP13.13□□□□□ -0.31
ECM1-202ENST00000369047 CDRT15Q96T59 188 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 DERL2Q9GZP9 239 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 VCXQ9H320 206 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 CEP290O15078 2479 aa13.13□□□□□ -0.31
ECM1-202ENST00000369047 LINC01553A4QN01 128 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 A6NHS1 94 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 BUD23O43709 281 aaKnown RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 PEX1O43933 1283 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 NDUFS3O75489 264 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 SMNDC1O75940 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
ECM1-202ENST00000369047 SEC24AO95486 1093 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 PRLP01236 227 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 SLC4A1P02730 911 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 SOD2P04179 222 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 PYGLP06737 847 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 RPL17P18621 184 aaKnown RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 PPM1AP35813 382 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 SEMA3AQ14563 771 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 ZNF423Q2M1K9 1284 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 UNC50Q53HI1 259 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 INO80DQ53TQ3 878 aaPredicted RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 TCHHL1Q5QJ38 904 aaPredicted RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 ZFP1Q6P2D0 407 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 TMCO2Q7Z6W1 182 aaPredicted RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 TMEM126BQ8IUX1 230 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 PYDC1Q8WXC3 89 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 KIAA1191Q96A73 305 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 PTERQ96BW5 349 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 ECSITQ9BQ95 431 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 WDR41Q9HAD4 459 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 POLR3BQ9NW08 1133 aaPredicted RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 ZDHHC7Q9NXF8 308 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 MAFFQ9ULX9 164 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 YBX2Q9Y2T7 364 aaKnown RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 COMMD10Q9Y6G5 202 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 ANKRD36A6QL64 1941 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 LCHNA4D1U4 455 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 ANKRD66B4E2M5 251 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 CBX4O00257 560 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 F11P03951 625 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 ME2P23368 584 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 TTPAP49638 278 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 PLK1P53350 603 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 ERVK-21P61565 698 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 RAD51Q06609 339 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 PTPRCAPQ14761 206 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 RNF219Q5W0B1 726 aaPredicted RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 PIM3Q86V86 326 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 NKAPQ8N5F7 415 aaKnown RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 MDGA1Q8NFP4 955 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 OR4K2Q8NGD2 314 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 LPGAT1Q92604 370 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 CLP1Q92989 425 aaKnown RBP13.12□□□□□ -0.31
ECM1-202ENST00000369047 ZNF558Q96NG5 402 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 MUC3BQ9H195 1237 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 GKN1Q9NS71 199 aa13.12□□□□□ -0.31
ECM1-202ENST00000369047 C6orf203Q9P0P8 240 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms