RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.85□□□□□ -0.99
TPM3-213ENST00000368545 RBM23Q86U06 439 aaKnown RBP8.85□□□□□ -0.99
TPM3-213ENST00000368545 CHSY1Q86X52 802 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 ARHGAP12Q8IWW6 846 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 ZBED8Q8IZ13 594 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 UMODL1-AS1Q8N2C9 162 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 CCDC33Q8N5R6 958 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 LRRC39Q96DD0 335 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 ATP6V1G3Q96LB4 118 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 PPP1R2P1Q96PQ5 205 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 PRMT1Q99873 361 aaKnown RBP8.85□□□□□ -0.99
TPM3-213ENST00000368545 CCDC77Q9BR77 488 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 BOCQ9BWV1 1114 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 SLC12A9Q9BXP2 914 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 STMN4Q9H169 189 aaPredicted RBP8.85□□□□□ -0.99
TPM3-213ENST00000368545 TMBIM4Q9HC24 238 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 SEPT10Q9P0V9 454 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 VPS18Q9P253 973 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 KLHL8Q9P2G9 620 aaPredicted RBP8.85□□□□□ -0.99
TPM3-213ENST00000368545 CHD5Q8TDI0 1954 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 GVINP1Q7Z2Y8 2422 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 A0A087WUV0 522 aaPredicted RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 ERI2A8K979 691 aaKnown RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 SHISA8B8ZZ34 492 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 GOLGA8MH3BSY2 632 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 DFFAO00273 331 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 ACSL4O60488 711 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 C8AP07357 584 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 HMBSP08397 361 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 PFKLP17858 780 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 TACR2P21452 398 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 PTPN3P26045 913 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 WASHC5Q12768 1159 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 ANO4Q32M45 955 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 C5orf22Q49AR2 442 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 CCDC38Q502W7 563 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 DNAJC21Q5F1R6 531 aaKnown RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 RABGAP1LQ5R372 815 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 RAP1GAP2Q684P5 730 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 GPR149Q86SP6 731 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 ZNF567Q8N184 647 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 AGGF1Q8N302 714 aaeCLIP8.84□□□□□ -0.99
TPM3-213ENST00000368545 ATP11CQ8NB49 1132 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 PYROXD1Q8WU10 500 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 FATE1Q969F0 183 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 PWWP2AQ96N64 755 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 RPRD1AQ96P16 312 aaPredicted RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 SERPINB12Q96P63 405 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 GCNAQ96QF7 691 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 KCNJ15Q99712 375 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 DDX50Q9BQ39 737 aaKnown RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 HDAC8Q9BY41 377 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 GBA3Q9H227 469 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 SMOC1Q9H4F8 434 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 SMURF1Q9HCE7 757 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 XAB2Q9HCS7 855 aaKnown RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 TRANK1O15050 2925 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 TCRBV7S3A2A0A539 114 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 ARHGAP42A6NI28 874 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 DRGXA6NNA5 263 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 RASGRF2O14827 1237 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 SPAG6O75602 509 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 METTL18O95568 372 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 FGF19O95750 216 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 OLFM2O95897 454 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 SHBGP04278 402 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 MLNP12872 115 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 ATP5DP30049 168 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 CDC25CP30307 473 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 LSP1P33241 339 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 LMAN1P49257 510 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 IFI35P80217 286 aaPredicted RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 CRY1Q16526 586 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 KYNUQ16719 465 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 TEX44Q53QW1 395 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 TTMPQ5BVD1 217 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 FNBP1LQ5T0N5 605 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 PLPP4Q5VZY2 271 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 FBXL22Q6P050 247 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 PID1Q7Z2X4 250 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 CNPY4Q8N129 248 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 MRPL43Q8N983 215 aaKnown RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 FAM156AQ8NDB6 213 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 FAM76AQ8TAV0 307 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 ZCCHC14Q8WYQ9 949 aaKnown RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 PGM2Q96G03 612 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 CELF6Q96J87 481 aaKnown RBP8.84□□□□□ -0.99
TPM3-213ENST00000368545 C9orf72Q96LT7 481 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 ZDHHC5Q9C0B5 715 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 KCNK12Q9HB15 430 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 SEMA4GQ9NTN9 838 aa8.84□□□□□ -0.99
TPM3-213ENST00000368545 COL4A3Q01955 1670 aa8.83□□□□□ -1
TPM3-213ENST00000368545 KCNK1O00180 336 aa8.83□□□□□ -1
TPM3-213ENST00000368545 MATN3O15232 486 aa8.83□□□□□ -1
TPM3-213ENST00000368545 POLR3GO15318 223 aaPredicted RBP8.83□□□□□ -1
TPM3-213ENST00000368545 MAFKO60675 156 aa8.83□□□□□ -1
TPM3-213ENST00000368545 STC2O76061 302 aa8.83□□□□□ -1
TPM3-213ENST00000368545 PAPLNO95428 1278 aa8.83□□□□□ -1
TPM3-213ENST00000368545 PSMB4P28070 264 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms