RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SPRP35270 261 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 CTSOP43234 321 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 KPNA1P52294 538 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 NAA20P61599 178 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 AP2B1P63010 937 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 ASPHQ12797 758 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 MYLK3Q32MK0 819 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 ANKDD1AQ495B1 522 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 RALGPS1Q5JS13 557 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 TMEM53Q6P2H8 277 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 ACAD11Q709F0 780 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 OR6P1Q8NGX9 317 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 HERVK_113Q902F9 699 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 PLD4Q96BZ4 506 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 TRMT2BQ96GJ1 504 aaKnown RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 NAT9Q9BTE0 207 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 ARMC7Q9H6L4 198 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 BPIFA1Q9NP55 256 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 ZDHHC4Q9NPG8 344 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 UBA2Q9UBT2 640 aaPredicted RBP10.67□□□□□ -0.7
TPM3-212ENST00000368533 ADAMTS6Q9UKP5 1117 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 SLC39A10Q9ULF5 831 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 WNT6Q9Y6F9 365 aa10.67□□□□□ -0.7
TPM3-212ENST00000368533 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
TPM3-212ENST00000368533 A0A1B0GVM2 712 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 TCAF2A6NFQ2 919 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 NEDD8-MDP1E9PL57 170 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 H3BSA7 217 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 INSIG1O15503 277 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 DCXO43602 365 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 NDUFB5O43674 189 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 PRAMEF11O60813 436 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 TM7SF2O76062 418 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 GLRBP48167 497 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 NRIP1P48552 1158 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 COPAP53621 1224 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 GEMP55040 296 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 CDH4P55283 916 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 ARF5P84085 180 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 PCLAFQ15004 111 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 GRAMD1BQ3KR37 738 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 SIRPB2Q5JXA9 342 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 TIFABQ6ZNK6 161 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 NANOGNBQ7Z5D8 188 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 ZBTB46Q86UZ6 589 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 TMEM25Q86YD3 366 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 ARRDC2Q8TBH0 407 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 ACMSDQ8TDX5 336 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 SREK1Q8WXA9 508 aaKnown RBP10.66□□□□□ -0.7
TPM3-212ENST00000368533 TSNARE1Q96NA8 513 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 CCDC106Q9BWC9 280 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 LRRC3Q9BY71 257 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 EIF2B3Q9NR50 452 aaKnown RBP10.66□□□□□ -0.7
TPM3-212ENST00000368533 COPG2Q9UBF2 871 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 SOX13Q9UN79 622 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 AK5Q9Y6K8 562 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 MYO15AQ9UKN7 3530 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 MIA3Q5JRA6 1907 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 A0A096LPK6 155 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 TMEM247A6NEH6 219 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 PHGDHO43175 533 aaKnown RBP10.66□□□□□ -0.7
TPM3-212ENST00000368533 E2F6O75461 281 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 IL1BP01584 269 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 NFKBIAP25963 317 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 CD70P32970 193 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 MTTPP55157 894 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 GSTM4Q03013 218 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 GPM6BQ13491 265 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 DCTN2Q13561 401 aaKnown RBP10.66□□□□□ -0.7
TPM3-212ENST00000368533 TRMT5Q32P41 509 aaKnown RBP10.66□□□□□ -0.7
TPM3-212ENST00000368533 EML3Q32P44 896 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 PARP15Q460N3 678 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 ZNF789Q5FWF6 425 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 PDPK2PQ6A1A2 396 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 CCDC149Q6ZUS6 474 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 PLD6Q8N2A8 252 aaKnown RBP10.66□□□□□ -0.7
TPM3-212ENST00000368533 ZNF366Q8N895 744 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 ITFG1Q8TB96 612 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 RAB3IL1Q8TBN0 382 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 SORCS1Q8WY21 1168 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 CDK5RAP1Q96SZ6 601 aaKnown RBP10.66□□□□□ -0.7
TPM3-212ENST00000368533 MKS1Q9NXB0 559 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 PTTG2Q9NZH5 202 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 CIDEBQ9UHD4 219 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 PACSIN3Q9UKS6 424 aa10.66□□□□□ -0.7
TPM3-212ENST00000368533 C15orf38-AP3S2A0A0A6YYH1 394 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 TRAV19A0A0A6YYK7 116 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 CAPN8A6NHC0 703 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 WASH4PA8MWX3 477 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 MAGEC1O60732 1142 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 SIN3BO75182 1162 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 KLHL2O95198 593 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 CLPTM1O96005 669 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 SMIM18P0DKX4 95 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 CTPS1P17812 591 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 SLC5A2P31639 672 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 ARSDP51689 593 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 ABCE1P61221 599 aaKnown RBP10.65□□□□□ -0.7
TPM3-212ENST00000368533 IRF9Q00978 393 aa10.65□□□□□ -0.7
TPM3-212ENST00000368533 NRG1Q02297 640 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms