RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MPP5Q8N3R9 675 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 DCLK2Q8N568 766 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 TMEM145Q8NBT3 493 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 BBOF1Q8ND07 529 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 DENND6BQ8NEG7 585 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 PPHLN1Q8NEY8 458 aaKnown RBP13.85□□□□□ -0.19
TPM3-211ENST00000368531 OR13H1Q8NG92 308 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 KLHDC7BQ96G42 594 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 DNAJC1Q96KC8 554 aaKnown RBP13.85□□□□□ -0.19
TPM3-211ENST00000368531 RHOXF2Q9BQY4 288 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 SPATA16Q9BXB7 569 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 EPB41L5Q9HCM4 733 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 XAB2Q9HCS7 855 aaKnown RBP13.85□□□□□ -0.19
TPM3-211ENST00000368531 SUSD2Q9UGT4 822 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 OR1A2Q9Y585 309 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 HS3ST3A1Q9Y663 406 aa13.85□□□□□ -0.19
TPM3-211ENST00000368531 HEATR9A2RTY3 570 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 A6NNZ2 444 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 PRR5-ARHGAP8B1AHC4 643 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 AP3B1O00203 1094 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 INPP4BO15327 924 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 RETP07949 1114 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 THEGLP0DJG4 465 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 ADRA1DP25100 572 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 SPAM1P38567 509 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 AFF3P51826 1226 aaKnown RBP13.84□□□□□ -0.19
TPM3-211ENST00000368531 ZNF140P52738 457 aaPredicted RBP13.84□□□□□ -0.19
TPM3-211ENST00000368531 C21orf59P57076 290 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 CHRNA6Q15825 494 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 BBS9Q3SYG4 887 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 TRIM61Q5EBN2 209 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 PCID2Q5JVF3 399 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 TEX35Q5T0J7 233 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 TCEAL6Q6IPX3 200 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 CES3Q6UWW8 571 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 HOOK3Q86VS8 718 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 MFSD2AQ8NA29 543 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 STYXQ8WUJ0 223 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 TCEAL3Q969E4 200 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 ZNF778Q96MU6 729 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 APOOQ9BUR5 198 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 IL22Q9GZX6 179 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 SUDS3Q9H7L9 328 aaPredicted RBP13.84□□□□□ -0.19
TPM3-211ENST00000368531 CHRAC1Q9NRG0 131 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 RAD18Q9NS91 495 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 KCTD5Q9NXV2 234 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 GRHL1Q9NZI5 618 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 WHRNQ9P202 907 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 SLC2A6Q9UGQ3 507 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 DMGDHQ9UI17 866 aaKnown RBP13.84□□□□□ -0.19
TPM3-211ENST00000368531 FKBPLQ9UIM3 349 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 TCAF1Q9Y4C2 921 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 PCDHGA5Q9Y5G8 931 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 MAD1L1Q9Y6D9 718 aa13.84□□□□□ -0.19
TPM3-211ENST00000368531 ZNF106Q9H2Y7 1883 aaKnown RBP13.84□□□□□ -0.19
TPM3-211ENST00000368531 TDRD6O60522 2096 aaKnown RBP13.84□□□□□ -0.19
TPM3-211ENST00000368531 A0A1W2PR77 199 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 RGSL1A5PLK6 1076 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 MROH6A6NGR9 719 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 SDR42E2A6NKP2 422 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 FADS2P1A8MWK0 482 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 TLR4O00206 839 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 MLNP12872 115 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 TSHRP16473 764 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 NMBRP28336 390 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 DPP6P42658 865 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 THOP1P52888 689 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 PLTPP55058 493 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 IRX4P78413 519 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 PDE1BQ01064 536 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 SF3A2Q15428 464 aaKnown RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 SMAD1Q15797 465 aaKnown RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 MSS51Q4VC12 460 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 GLE1Q53GS7 698 aaKnown RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 PRAMEF14Q5SWL7 426 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 TSTD2Q5T7W7 516 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 HENMT1Q5T8I9 393 aaKnown RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 PEAR1Q5VY43 1037 aaPredicted RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 KYAT3Q6YP21 454 aaKnown RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 ZNF765Q7L2R6 523 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 ASCL5Q7RTU5 278 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 ABI3BPQ7Z7G0 1075 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 TRIM74Q86UV6 250 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 HEATR4Q86WZ0 1026 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 CEP76Q8TAP6 659 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 SKA1Q96BD8 255 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 TBATAQ96M53 351 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 RANBP9Q96S59 729 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 TRIM56Q9BRZ2 755 aaKnown RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 FAM96AQ9H5X1 160 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 ARFGAP3Q9NP61 516 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 IL26Q9NPH9 171 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 NLE1Q9NVX2 485 aaPredicted RBP13.83□□□□□ -0.2
TPM3-211ENST00000368531 SAMD15Q9P1V8 674 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 PLXNB3Q9ULL4 1909 aa13.83□□□□□ -0.2
TPM3-211ENST00000368531 GLYATL1P3A0A0U1RQE8 302 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 PROB1E7EW31 1015 aa13.82□□□□□ -0.2
TPM3-211ENST00000368531 NDC80O14777 642 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms