RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 IL5RAQ01344 420 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 TRAP1Q12931 704 aaKnown RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ACAP2Q15057 778 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 TRIM71Q2Q1W2 868 aaKnown RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 DENND5AQ6IQ26 1287 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ZNF621Q6ZSS3 439 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 TTC7BQ86TV6 843 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SYT12Q8IV01 421 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 PHC3Q8NDX5 983 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 TXNRD2Q9NNW7 524 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ZNF224Q9NZL3 707 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 INVSQ9Y283 1065 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 BTRCQ9Y297 605 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 S100A6P06703 90 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 PORP16435 677 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 CTPS1P17812 591 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 PTPN3P26045 913 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 GRIA3P42263 894 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 LIMK2P53671 638 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 DPYSL2Q16555 572 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 FNDC3BQ53EP0 1204 aaKnown RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 TXNRD3NBQ6F5E7 133 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 GPRIN3Q6ZVF9 776 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SPATA22Q8NHS9 363 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ACTRT2Q8TDY3 377 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 PTCD2Q8WV60 388 aaKnown RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 LRRC42Q9Y546 428 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 CLDN25C9JDP6 229 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 TGDSO95455 350 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SGCGQ13326 291 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 MYBPC3Q14896 1274 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ANGPT1Q15389 498 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 RHBDF2Q6PJF5 856 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SCIMPQ6UWF3 145 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ZDHHC13Q8IUH4 622 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ADCY4Q8NFM4 1077 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 EFHD2Q96C19 240 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 DGCR6LQ9BY27 220 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 RNF38Q9H0F5 515 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 WDR55Q9H6Y2 383 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 TRPC4Q9UBN4 977 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ANAPC2Q9UJX6 822 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 FZD10Q9ULW2 581 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SAGE2PA6NJ88 616 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SELPP16109 830 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 GRK4P32298 578 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 PFKPQ01813 784 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 TOP3AQ13472 1001 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 PWP1Q13610 501 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 MZT2BQ6NZ67 158 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 CYP4Z1Q86W10 505 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 CACUL1Q86Y37 369 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 BRI3BPQ8WY22 251 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 ELMO1Q92556 727 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 REPS1Q96D71 796 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 MTFMTQ96DP5 389 aaKnown RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 NSMCE3Q96MG7 304 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 CAPN10Q9HC96 672 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 C8orf4Q9NR00 106 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 LEF1Q9UJU2 399 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-204ENST00000368210 SNX8Q9Y5X2 465 aa13.25□□□□□ -0.29
PTPRK-204ENST00000368210 M0QX08 132 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 FFAR3O14843 346 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 GPR42O15529 346 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 ADH1AP07327 375 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 TCF4P15884 667 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 MC4RP32245 332 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 TMEM26Q6ZUK4 368 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 FBXW11Q9UKB1 542 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 TRAF6Q9Y4K3 522 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 TRIM38O00635 465 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 ITGAXP20702 1163 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 PRKG2Q13237 762 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 TXNDC11Q6PKC3 985 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 CCDC28AQ8IWP9 274 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 DNAJB14Q8TBM8 379 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 SUSD6Q92537 303 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 ITPKCQ96DU7 683 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 BORCS6Q96GS4 357 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 LPIN3Q9BQK8 851 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 ACAT2Q9BWD1 397 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 NUAK2Q9H093 628 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 KRT84Q9NSB2 600 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 MRPL39Q9NYK5 338 aaKnown RBP13.24□□□□□ -0.29
PTPRK-204ENST00000368210 C2orf71A6NGG8 1288 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 MOXD2PA6NHM9 499 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 FKTNO75072 461 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 IFNA16P05015 189 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 MPSTP25325 297 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 PPP2R1BP30154 601 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 PPM1AP35813 382 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 CREMQ03060 361 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 TGM3Q08188 693 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 LGALS3BPQ08380 585 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 GRM3Q14832 879 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 FAM187BQ17R55 369 aa13.24□□□□□ -0.29
PTPRK-204ENST00000368210 NIPAL1Q6NVV3 410 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms