RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 OR13C4Q8NGS5 318 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 LENG8Q96PV6 779 aaPredicted RBP13.99□□□□□ -0.17
USF1-202ENST00000368020 DERL2Q9GZP9 239 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 ALG9Q9H6U8 611 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 WDR55Q9H6Y2 383 aaPredicted RBP13.99□□□□□ -0.17
USF1-202ENST00000368020 EFCAB1Q9HAE3 211 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 TLR9Q9NR96 1032 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 LSM7Q9UK45 103 aaKnown RBP13.99□□□□□ -0.17
USF1-202ENST00000368020 CRYL1Q9Y2S2 319 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 KCTD3Q9Y597 815 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 INSL5Q9Y5Q6 135 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 DENND4CQ5VZ89 1909 aa13.99□□□□□ -0.17
USF1-202ENST00000368020 ANKRD66B4E2M5 251 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 H7C0S8 307 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 MAP3K7O43318 606 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 TBX10O75333 385 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 RPSAP08865 295 aaKnown RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 PFKLP17858 780 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 PBX2P40425 430 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 CLCN4P51793 760 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 MTTPP55157 894 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 ADARP55265 1226 aaKnown RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 RPL26P61254 145 aaKnown RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 AP1S1P61966 158 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 RAD51Q06609 339 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 TWF1Q12792 350 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 ZNF678Q5SXM1 525 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 DNAJB7Q7Z6W7 309 aaPredicted RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 DCAF4L2Q8NA75 395 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 OR52K2Q8NGK3 314 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 STAG3L4Q8TBR4 150 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 ANKRD49Q8WVL7 239 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 POF1BQ8WVV4 589 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.98□□□□□ -0.17
USF1-202ENST00000368020 SGF29Q96ES7 293 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 SLC28A3Q9HAS3 691 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 RAI2Q9Y5P3 530 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 TRIOBPQ9H2D6 2365 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 LOC100653049A0A140TA62 436 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 OR51F1A6NGY5 319 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 SDHDO14521 159 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 KERAO60938 352 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 KRT34O76011 436 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 TMCC1O94876 653 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 OLFM2O95897 454 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 IRF1P10914 325 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 ATP4BP51164 291 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 SQLEQ14534 574 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 UGT3A1Q6NUS8 523 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 CHSY3Q70JA7 882 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 SNX32Q86XE0 403 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 FAM217AQ8IXS0 508 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 PGAM4Q8N0Y7 254 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 MRPL43Q8N983 215 aaKnown RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 LPCAT1Q8NF37 534 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 OR4K2Q8NGD2 314 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 LPGAT1Q92604 370 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 N4BP2L2Q92802 583 aaPredicted RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 KIAA1191Q96A73 305 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 ZNF570Q96NI8 536 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 C2orf49Q9BVC5 232 aaPredicted RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 RNF38Q9H0F5 515 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 SUDS3Q9H7L9 328 aaPredicted RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 PFDN4Q9NQP4 134 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 GKN1Q9NS71 199 aa13.98□□□□□ -0.17
USF1-202ENST00000368020 UTP6Q9NYH9 597 aaKnown RBP13.98□□□□□ -0.17
USF1-202ENST00000368020 CHD9Q3L8U1 2897 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.97□□□□□ -0.17
USF1-202ENST00000368020 C2orf78A6NCI8 922 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 STX7O15400 261 aaKnown RBP13.97□□□□□ -0.17
USF1-202ENST00000368020 TBL1XO60907 577 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 VPS26AO75436 327 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 SRP72O76094 671 aaKnown RBP13.97□□□□□ -0.17
USF1-202ENST00000368020 RHOBTB1O94844 696 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 CXCL14O95715 111 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 SLC4A1P02730 911 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 F11P03951 625 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 FGF4P08620 206 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 ANPEPP15144 967 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 CDC25CP30307 473 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 NUDT2P50583 147 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 PGGT1BP53609 377 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 SESN3P58005 492 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 ERVFC1P60507 584 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 ARF5P84085 180 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 CDC16Q13042 620 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 STX5Q13190 355 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 CDH18Q13634 790 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 MPP7Q5T2T1 576 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 PPP2R2DQ66LE6 453 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 RETSATQ6NUM9 610 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 ZNF549Q6P9A3 640 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 NCEH1Q6PIU2 408 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 BNC2Q6ZN30 1099 aaPredicted RBP13.97□□□□□ -0.17
USF1-202ENST00000368020 LDB1Q86U70 411 aaPredicted RBP13.97□□□□□ -0.17
USF1-202ENST00000368020 PELI3Q8N2H9 469 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 ACDQ96AP0 544 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 TMA16Q96EY4 203 aaKnown RBP13.97□□□□□ -0.17
USF1-202ENST00000368020 CLPTM1LQ96KA5 538 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms