RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SH3RF2Q8TEC5 729 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 FIG4Q92562 907 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 NT5C3BQ969T7 300 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 SMARCD1Q96GM5 515 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 MRGPRX2Q96LB1 330 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 NSMCE2Q96MF7 247 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 MUS81Q96NY9 551 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 PPP1R10Q96QC0 940 aaKnown RBP8.17□□□□□ -1.1
CD46-208ENST00000367042 ACOX2Q99424 681 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 GPATCH1Q9BRR8 931 aaKnown RBP8.17□□□□□ -1.1
CD46-208ENST00000367042 CHID1Q9BWS9 393 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 PRKD2Q9BZL6 878 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 SLAMF8Q9P0V8 285 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 MAP10Q9P2G4 905 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 UXTQ9UBK9 157 aaPredicted RBP8.17□□□□□ -1.1
CD46-208ENST00000367042 RAD54BQ9Y620 910 aa8.17□□□□□ -1.1
CD46-208ENST00000367042 MATN3O15232 486 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 TREHO43280 583 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SNAP91O60641 907 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SNX2O60749 519 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 DDNO94850 711 aaPredicted RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 CDK14O94921 469 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 GLP2RO95838 553 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 POMCP01189 267 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 MMP3P08254 477 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SMIM10L2AP0DMW4 78 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SMIM10L2BP0DMW5 78 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SLC2A3P11169 496 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 IL7RP16871 459 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 FMO4P31512 558 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 OCA2Q04671 838 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SFSWAPQ12872 951 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 BNIP2Q12982 314 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 GALNT3Q14435 633 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SNX17Q15036 470 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 POLD3Q15054 466 aaPredicted RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 RGS21Q2M5E4 152 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 USP41Q3LFD5 358 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 UNC50Q53HI1 259 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 MARC1Q5VT66 337 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 CCDC81Q6ZN84 652 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 LYSMD3Q7Z3D4 306 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 MIB1Q86YT6 1006 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 FBXO39Q8N4B4 442 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 ZMIZ2Q8NF64 920 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 PTERQ96BW5 349 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 ZNF419Q96HQ0 510 aaPredicted RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 BDH2Q9BUT1 245 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 EXD2Q9NVH0 621 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 U3KQV3 271 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 DICER1Q9UPY3 1922 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 AQP12BA6NM10 295 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SYCE1LA8MT33 242 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 H0YJX3 145 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 J3KR12 359 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 NOBOXO60393 691 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 CLASP2O75122 1294 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 PRSS56P0CW18 603 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 FCGR1AP12314 374 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SMPD1P17405 629 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 CDH3P22223 829 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 GPX3P22352 226 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 WARSP23381 471 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 MYF6P23409 242 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SLC6A2P23975 617 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 VARSP26640 1264 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 ALDH4A1P30038 563 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 AIF1P55008 147 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 MTPNP58546 118 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 ATP6V0D1P61421 351 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 HERVK_113P63132 956 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 PLA2G4EQ3MJ16 856 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 NOL9Q5SY16 702 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 TAPT1Q6NXT6 567 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 PRMT9Q6P2P2 845 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 ELMSAN1Q6PJG2 1045 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 AQP12AQ8IXF9 295 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 CDYL2Q8N8U2 506 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 TRPV3Q8NET8 790 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 KCTD13Q8WZ19 329 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 TBCDQ9BTW9 1192 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 ERVK-6Q9BXR3 956 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 AGPAT4Q9NRZ5 378 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 POLG2Q9UHN1 485 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 RBMX2Q9Y388 322 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 SNX5Q9Y5X3 404 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 ARL5AQ9Y689 179 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 KDM1AO60341 852 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SYNCRIPO60506 623 aaKnown RBP8.16□□□□□ -1.1
CD46-208ENST00000367042 MAFKO60675 156 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 KATNA1O75449 491 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 BRCC3P46736 316 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 LHX1P48742 406 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 SCNN1GP51170 649 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 BMXP51813 675 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 IST1P53990 364 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 RAD23AP54725 363 aa8.16□□□□□ -1.1
CD46-208ENST00000367042 UFM1P61960 85 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms