RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TECRLQ5HYJ1 363 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 NOMO2Q5JPE7 1267 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 RBM20Q5T481 1227 aaKnown RBP14.71□□□□□ -0.05
PRKN-204ENST00000366896 TIGD7Q6NT04 549 aaPredicted RBP14.71□□□□□ -0.05
PRKN-204ENST00000366896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.71□□□□□ -0.05
PRKN-204ENST00000366896 ZBTB49Q6ZSB9 765 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 ANKFN1Q8N957 763 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 HMGCLL1Q8TB92 370 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 SPPL2BQ8TCT7 592 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 CALML6Q8TD86 181 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 TRMOQ9BU70 441 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 CATSPERBQ9H7T0 1116 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 CYP4F12Q9HCS2 524 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 IGSF5Q9NSI5 407 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 NDFIP2Q9NV92 336 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 FBXO5Q9UKT4 447 aa14.71□□□□□ -0.05
PRKN-204ENST00000366896 CNOT6Q9ULM6 557 aaKnown RBP14.71□□□□□ -0.05
PRKN-204ENST00000366896 HEATR9A2RTY3 570 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 CCDC85CA6NKD9 419 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 POMCP01189 267 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 ACRP10323 421 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 ZNF12P17014 697 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 KCNA5P22460 613 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 RPL10P27635 214 aaKnown RBP14.7□□□□□ -0.06
PRKN-204ENST00000366896 SLC26A3P40879 764 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 ATP4BP51164 291 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 LRP8Q14114 963 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 ZNF789Q5FWF6 425 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 AFMIDQ63HM1 303 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 GLB1LQ6UWU2 654 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 LYSMD3Q7Z3D4 306 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 FATE1Q969F0 183 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 DOK1Q99704 481 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 RTP3Q9BQQ7 232 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 EFHD1Q9BUP0 239 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 PAIP1Q9H074 479 aaKnown RBP14.7□□□□□ -0.06
PRKN-204ENST00000366896 IL23AQ9NPF7 189 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 ABHD14A-ACY1A0A1B0GW23 586 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 CASTOR2A6NHX0 329 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 SOCS2O14508 198 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 ATE1O95260 518 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 HLA-DQB2P05538 268 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 RBP1P09455 135 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 CKMT2P17540 419 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 HDCP19113 662 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 RPL9P32969 192 aaKnown RBP14.7□□□□□ -0.06
PRKN-204ENST00000366896 CCR3P51677 355 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 CLCN5P51795 746 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 SEPT6Q14141 434 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 AGAP9Q5VTM2 703 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 SLC22A9Q8IVM8 553 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 SNX31Q8N9S9 440 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 ZNF420Q8TAQ5 688 aaPredicted RBP14.7□□□□□ -0.06
PRKN-204ENST00000366896 BADQ92934 168 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 TBC1D13Q9NVG8 400 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 LRFN2Q9ULH4 789 aa14.7□□□□□ -0.06
PRKN-204ENST00000366896 FUOMA2VDF0 154 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 PRORSD1PA6NEY8 169 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 AKAP10O43572 662 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 IPO13O94829 963 aaKnown RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 INHBBP09529 407 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 BMP2P12643 396 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 CPB1P15086 417 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 BDNFP23560 247 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 SLC12A2P55011 1212 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 NRG1Q02297 640 aaPredicted RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 CSHL1Q14406 222 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 FAM171BQ6P995 826 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 DCDC5Q6ZRR9 648 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 RNF135Q8IUD6 432 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 NPAS4Q8IUM7 802 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 ZNF513Q8N8E2 541 aaPredicted RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 TNIP2Q8NFZ5 429 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 TBC1D15Q8TC07 691 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 PBXIP1Q96AQ6 731 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 THAP11Q96EK4 314 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 TSPAN17Q96FV3 270 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 SLC39A8Q9C0K1 460 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 RPF2Q9H7B2 306 aaKnown RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 CACNA2D2Q9NY47 1150 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 CD300AQ9UGN4 299 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 COQ6Q9Y2Z9 468 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 TMX2-CTNND1H3BSU7 103 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 IRAK2O43187 625 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 FOXD2O60548 495 aaPredicted RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 PAPSS2O95340 614 aaPredicted RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 MYF6P23409 242 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 LEPRP48357 1165 aaKnown RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 PSMD7P51665 324 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 OXCT1P55809 520 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 PRAMEP78395 509 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 PRKCQQ04759 706 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 RALGDSQ12967 914 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 BTG3Q14201 252 aaPredicted RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 PPP1R3AQ16821 1122 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 PAN2Q504Q3 1202 aaKnown RBP14.69□□□□□ -0.06
PRKN-204ENST00000366896 C6orf10Q5SRN2 563 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 ARTNQ5T4W7 220 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 GRAMD4Q6IC98 578 aa14.69□□□□□ -0.06
PRKN-204ENST00000366896 FAM45BPQ6NSW5 357 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms