RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SNRNP40Q96DI7 357 aaKnown RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 C5orf34Q96MH7 638 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZPBPQ9BS86 351 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC25A23Q9BV35 468 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 GSDMCQ9BYG8 508 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 ULBP3Q9BZM4 244 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 GOLPH3LQ9H4A5 285 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 SUV39H2Q9H5I1 410 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 WDR26Q9H7D7 661 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 UPF2Q9HAU5 1272 aaKnown RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 UBE2TQ9NPD8 197 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 PPARGC1AQ9UBK2 798 aaKnown RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 KLHL3Q9UH77 587 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 AJAP1Q9UKB5 411 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 ENTPD4Q9Y227 616 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 ATP8A1Q9Y2Q0 1164 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 PCDHGA9Q9Y5G4 932 aaKnown RBP8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 PCDHGA6Q9Y5G7 932 aa8.46□□□□□ -1.06
HMGB1P39-201ENST00000366304 PCSK5Q92824 1860 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 FAM237AA0A1B0GTK4 181 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 MED7O43513 233 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 CEACAM4O75871 244 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 KIAA0754O94854 1291 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 TIAF1O95411 115 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 IGSF6O95976 241 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 MYCLP1P12525 358 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 TNFAIP3P21580 790 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 CMA1P23946 247 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 NFKBIAP25963 317 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 FASLGP48023 281 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 SUOXP51687 545 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 GFERP55789 205 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 RHOAP61586 193 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 GPLD1P80108 840 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 FKBP3Q00688 224 aaKnown RBP8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 ILF3Q12906 894 aaKnown RBP eCLIP8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 DNASE1L3Q13609 305 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 PTPRRQ15256 657 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 TESK1Q15569 626 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC25A52Q3SY17 297 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 PLEKHN1Q494U1 663 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 AFMIDQ63HM1 303 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 SP5Q6BEB4 398 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC34A3Q8N130 599 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 FNIP1Q8TF40 1166 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 NCSTNQ92542 709 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 MOCOSQ96EN8 888 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 ELMO2Q96JJ3 720 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 COQ10AQ96MF6 247 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 CFAP57Q96MR6 1250 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 DPYSL5Q9BPU6 564 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 TEX101Q9BY14 249 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 ACTL8Q9H568 366 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 TMEM248Q9NWD8 314 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 TRNAU1APQ9NX07 287 aaKnown RBP8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 PPP4R2Q9NY27 417 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 OGFRQ9NZT2 677 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 USP25Q9UHP3 1055 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 NTNG1Q9Y2I2 539 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 ANKHD1Q8IWZ3 2542 aaKnown RBP8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 POLEQ07864 2286 aa8.45□□□□□ -1.06
HMGB1P39-201ENST00000366304 NAV3Q8IVL0 2385 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 A0A0U1RQS6 177 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 ARGFXA6NJG6 315 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 DIAPH2O60879 1101 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 PNMA6AP0CW24 399 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 RHOQP17081 205 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 XPAP23025 273 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 KELP23276 732 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 ACTR1BP42025 376 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 ACTR1AP61163 376 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 FOXM1Q08050 763 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 NFATC2Q13469 925 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 CRB2Q5IJ48 1285 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 FAM69BQ5VUD6 431 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 RWDD4Q6NW29 188 aaKnown RBP8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 ERAP2Q6P179 960 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 FAM199XQ6PEV8 388 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 KRBA2Q6ZNG9 492 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 RFLNAQ6ZTI6 216 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC47A2Q86VL8 602 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 SFRP1Q8N474 314 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 CISD2Q8N5K1 135 aaKnown RBP8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 HCAR2Q8TDS4 363 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 SCARF2Q96GP6 870 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 LURAP1Q96LR2 239 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 NUDT9Q9BW91 350 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 MAGEH1Q9H213 219 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 OR12D3Q9UGF7 316 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC17A4Q9Y2C5 497 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 TMEM98Q9Y2Y6 226 aa8.44□□□□□ -1.06
HMGB1P39-201ENST00000366304 ABCA2Q9BZC7 2435 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 CFAP69A5D8W1 941 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 A6NCN8 305 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 GOLGA6L3A6NEY3 463 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 ANKUB1A6NFN9 424 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 RAMP2O60895 175 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 LRIG2O94898 1065 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 RECKO95980 971 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms