RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 GJB7Q6PEY0 223 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 C1orf228Q6PIY5 440 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 SCARA5Q6ZMJ2 495 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 GBP6Q6ZN66 633 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 DENND5BQ6ZUT9 1274 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 PAQR9Q6ZVX9 377 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 MON1AQ86VX9 555 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 OR2C3Q8N628 320 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 OR56A1Q8NGH5 318 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 CLDN23Q96B33 292 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 MSANTD3Q96H12 275 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 GCNAQ96QF7 691 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 ERGIC2Q96RQ1 377 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 NELL2Q99435 816 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 CNPPD1Q9BV87 410 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 KRTAP4-2Q9BYR5 136 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 ZNF518BQ9C0D4 1074 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 GANQ9H2C0 597 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 DPEP3Q9H4B8 488 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 SLITRK6Q9H5Y7 841 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 HMGXB4Q9UGU5 601 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 CA14Q9ULX7 337 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 DMTF1Q9Y222 760 aa8.09□□□□□ -1.11
YBX3-204ENST00000366290 GPR179Q6PRD1 2367 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 COL4A3Q01955 1670 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 GOLGA6L19H0YKK7 550 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 K7ESM1 405 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 ZNF263O14978 683 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 ZNF185O15231 689 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 OLFM2O95897 454 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 TSHRP16473 764 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 TNFSF4P23510 183 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 MAGEA9P43362 315 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 RPS9P46781 194 aaKnown RBP8.08□□□□□ -1.12
YBX3-204ENST00000366290 STT3AP46977 705 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 SLC11A2P49281 568 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 NDST1P52848 882 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 CACNA2D1P54289 1103 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 UCP3P55916 312 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 POU6F2P78424 691 aaPredicted RBP8.08□□□□□ -1.12
YBX3-204ENST00000366290 PLP2Q04941 152 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 CUL2Q13617 745 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 RAB32Q13637 225 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 SYCP1Q15431 976 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 SDHAF4Q5VUM1 108 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 SNX30Q5VWJ9 437 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 ZNF585AQ6P3V2 769 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 PPP1R32Q7Z5V6 425 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 LIX1LQ8IVB5 337 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 CFAP52Q8N1V2 620 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 TTC39CQ8N584 583 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 ACRBPQ8NEB7 543 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 FAM46DQ8NEK8 389 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 OVCA2Q8WZ82 227 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 MRPS31Q92665 395 aaKnown RBP8.08□□□□□ -1.12
YBX3-204ENST00000366290 TWNKQ96RR1 684 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 DCLRE1CQ96SD1 692 aaKnown RBP8.08□□□□□ -1.12
YBX3-204ENST00000366290 PNKPQ96T60 521 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 KIF9Q9HAQ2 790 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 CSNK1G1Q9HCP0 422 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 HEBP1Q9NRV9 189 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 MRPS18AQ9NVS2 196 aaKnown RBP8.08□□□□□ -1.12
YBX3-204ENST00000366290 COMMD8Q9NX08 183 aa8.08□□□□□ -1.12
YBX3-204ENST00000366290 A0A087WWL8 130 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 CCDC78A2IDD5 438 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 ZNF840PA6NDX5 716 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 DIRC3C9JPN6 131 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 F8VP50 259 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 PES1O00541 588 aaKnown RBP8.07□□□□□ -1.12
YBX3-204ENST00000366290 RTN3O95197 1032 aaPredicted RBP8.07□□□□□ -1.12
YBX3-204ENST00000366290 ANXA13P27216 316 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 GDI1P31150 447 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 AVPR1AP37288 418 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 TUBP50607 506 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 PDE6CP51160 858 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 ZNF132P52740 706 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 GCNT1Q02742 428 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 UBXN1Q04323 297 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 PIGFQ07326 219 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 CETN1Q12798 172 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 KLHDC7AQ5VTJ3 777 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 TXNDC8Q6A555 127 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 SARM1Q6SZW1 724 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 ZNF852Q6ZMS4 543 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 RRAGAQ7L523 313 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 ACOT1Q86TX2 421 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 SCN4BQ8IWT1 228 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 CCDC33Q8N5R6 958 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 SLC15A4Q8N697 577 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 MAB21L3Q8N8X9 362 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 CCDC150Q8NCX0 1101 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 ANKRD20A12PQ8NF67 263 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 BPIFB1Q8TDL5 484 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 USP13Q92995 863 aaPredicted RBP8.07□□□□□ -1.12
YBX3-204ENST00000366290 SMARCD1Q96GM5 515 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 ZC3H10Q96K80 434 aaKnown RBP8.07□□□□□ -1.12
YBX3-204ENST00000366290 HNRNPABQ99729 332 aaKnown RBP8.07□□□□□ -1.12
YBX3-204ENST00000366290 XPO4Q9C0E2 1151 aaKnown RBP8.07□□□□□ -1.12
YBX3-204ENST00000366290 TTYH3Q9C0H2 523 aa8.07□□□□□ -1.12
YBX3-204ENST00000366290 C8orf33Q9H7E9 229 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms