RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 TADA1Q96BN2 335 aa13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 COX14Q96I36 57 aa13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 GFM1Q96RP9 751 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 AGAP2Q99490 1192 aa13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 LRRN3Q9H3W5 708 aa13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CARS2Q9HA77 564 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 PCDH9Q9HC56 1237 aa13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 THSD1Q9NS62 852 aa13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 RNF215Q9Y6U7 377 aa13.63□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ARHGEF17Q96PE2 2063 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CCDC187A0A096LP49 1063 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 LRRD1A4D1F6 860 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 AKR1B15C9JRZ8 316 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 D6RAR5 112 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 KCNK1O00180 336 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CLDN7O95471 211 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 RPLP0P05388 317 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TPM1P09493 284 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 KRT10P13645 584 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CCKBRP32239 447 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 SLC1A1P43005 524 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 HADHBP55084 474 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 B4GALNT1Q00973 533 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CCDC173Q0VFZ6 552 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 QPCTQ16769 361 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 RAET1GQ6H3X3 334 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 SPRED1Q7Z699 444 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CNGA4Q8IV77 575 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 NRSN1Q8IZ57 195 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TC2NQ8N9U0 490 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CCNYQ8ND76 341 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 AP2M1Q96CW1 435 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 EID2BQ96D98 161 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TRIB3Q96RU7 358 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 DPEP2Q9H4A9 486 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 HAUS2Q9NVX0 235 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TAAR2Q9P1P5 351 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 LRIT1Q9P2V4 623 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CD84Q9UIB8 345 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 DNPEPQ9ULA0 475 aa13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CNOT6Q9ULM6 557 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CFAP46Q8IYW2 2715 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 B4DGG1 531 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ANKRD66B4E2M5 251 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 B4GAT1O43505 415 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 LCA5LO95447 670 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 AK4P27144 223 aaPredicted RBP13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ADCY8P40145 1251 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CD86P42081 329 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 GPR1P46091 355 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 EPHB1P54762 984 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CTBSQ01459 385 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 FAM182AQ5T1J6 154 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 NPNTQ6UXI9 565 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TMPRSS9Q7Z410 1059 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CCNJLQ8IV13 435 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 EXD1Q8NHP7 514 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 KIAA1524Q8TCG1 905 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 IMP4Q96G21 291 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 GSDMCQ9BYG8 508 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 DPH1Q9BZG8 443 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 MOSPD1Q9UJG1 213 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 HEY1Q9Y5J3 304 aa13.61□□□□□ -0.23
TNFRSF1A-202ENST00000366159 SCN8AQ9UQD0 1980 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 APOL1O14791 398 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 PYGLP06737 847 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ITGA2BP08514 1039 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ZFXP17010 805 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CA4P22748 312 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 RBMS1P29558 406 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 CDKN2BP42772 138 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 GNPDA1P46926 289 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 SPINT3P49223 89 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 INHBCP55103 352 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ILF3Q12906 894 aaKnown RBP eCLIP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 EIF3IQ13347 325 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 PDK1Q15118 436 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 PYCR3Q53H96 274 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 HENMT1Q5T8I9 393 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 MFSD7Q6UXD7 560 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 SLITRK4Q8IW52 837 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 RHOT1Q8IXI2 618 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 NAGSQ8N159 534 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ARL14Q8N4G2 192 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 LPCAT1Q8NF37 534 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ZDHHC1Q8WTX9 485 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 SNRNP27Q8WVK2 155 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 MLPHQ9BV36 600 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 RIOK2Q9BVS4 552 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 FOXP3Q9BZS1 431 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 BRD8Q9H0E9 1235 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 DDX56Q9NY93 547 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TMEM98Q9Y2Y6 226 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 PLEKHM1Q9Y4G2 1056 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 HYOU1Q9Y4L1 999 aa13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TTLL3Q9Y4R7 772 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms