RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 GPR63Q9BZJ6 419 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ZFYVE1Q9HBF4 777 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 MAGEE1Q9HCI5 957 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 LRRC4CQ9HCJ2 640 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 POLMQ9NP87 494 aaPredicted RBP6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 PCDH12Q9NPG4 1184 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 SARDHQ9UL12 918 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 RIMKLBQ9ULI2 386 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 SCML1Q9UN30 329 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 PKP3Q9Y446 797 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ZNF711Q9Y462 761 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 ARL5AQ9Y689 179 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 RPS6KL1Q9Y6S9 549 aa6.78□□□□□ -1.32
RNU1-55P-201ENST00000365510 GOLGA4Q13439 2230 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 DSPP15924 2871 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 A0A087WUV0 522 aaPredicted RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 A0A1W2PQF6 199 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 TCRBV9S1A1TA0A576 114 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 MROH6A6NGR9 719 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 NPIPB15A6NHN6 443 aaPredicted RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 NEMP1O14524 444 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 MID1O15344 667 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 SLC7A4O43246 635 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 MAP3K13O43283 966 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 LDB2O43679 373 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ALDH1A2O94788 518 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ALPIP09923 528 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 NUDT17P0C025 328 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ELFN1P0C7U0 828 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ACADMP11310 421 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ADRB3P13945 408 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ENGP17813 658 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 LPOP22079 712 aaPredicted RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 VIPR1P32241 457 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 SLC8A1P32418 973 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 HNF1BP35680 557 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 MMP12P39900 470 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 HADHAP40939 763 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ABL2P42684 1182 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ZNF140P52738 457 aaPredicted RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 COPAP53621 1224 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 RPS14P62263 151 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 PRAMEP78395 509 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 IFFO1Q0D2I5 559 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 FRG1Q14331 258 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 CASP8Q14790 479 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 CRY1Q16526 586 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 KYNUQ16719 465 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 LONRF1Q17RB8 773 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 SKIDA1Q1XH10 827 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 KLHL38Q2WGJ6 581 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 MAP7D1Q3KQU3 841 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ANKRD20A4Q4UJ75 823 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 USP39Q53GS9 565 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 LRRC73Q5JTD7 316 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 TSTD2Q5T7W7 516 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ZDHHC20Q5W0Z9 365 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 LRRC66Q68CR7 880 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 KIAA0930Q6ICG6 404 aaPredicted RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ZNF449Q6P9G9 518 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 KIAA1324Q6UXG2 1013 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 C3orf62Q6ZUJ4 267 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ERN2Q76MJ5 926 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 HDXQ7Z353 690 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 LYSMD3Q7Z3D4 306 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 CYP2U1Q7Z449 544 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 TTC7BQ86TV6 843 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 TMEM135Q86UB9 458 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 RASSF3Q86WH2 238 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 TMPRSS6Q8IU80 811 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 IGDCC3Q8IVU1 814 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 AGGF1Q8N302 714 aaeCLIP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 PGBD3Q8N328 593 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 CAMKK1Q8N5S9 505 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 CXorf40AQ8TE69 158 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 GANCQ8TET4 914 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 STYXQ8WUJ0 223 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 CDKL2Q92772 493 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 RAB7BQ96AH8 199 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 VOPP1Q96AW1 172 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 MFSD3Q96ES6 412 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 SIPA1Q96FS4 1042 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 SCRN2Q96FV2 425 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 CRELD1Q96HD1 420 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 DNAJC1Q96KC8 554 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 OMDQ99983 421 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 MKRN2Q9H000 416 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 PPCSQ9HAB8 311 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 TMEM9BQ9NQ34 198 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 PPANQ9NQ55 473 aaKnown RBP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 CHRAC1Q9NRG0 131 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 TREX1Q9NSU2 369 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 BCCIPQ9P287 314 aaKnown RBP eCLIP6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 B4GALT6Q9UBX8 382 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 EBF1Q9UH73 591 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 LHX6Q9UPM6 363 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 PPIL1Q9Y3C6 166 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 PCDHGA5Q9Y5G8 931 aa6.77□□□□□ -1.33
RNU1-55P-201ENST00000365510 SPO11Q9Y5K1 396 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms