RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 BNIPLQ7Z465 357 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 TMEM135Q86UB9 458 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 NKAPQ8N5F7 415 aaKnown RBP12.24□□□□□ -0.45
COL20A1-201ENST00000358894 FAM47BQ8NA70 645 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 LRTOMTQ8WZ04 291 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 HAPLN3Q96S86 360 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 SH3GL1Q99961 368 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 C1orf21Q9H246 121 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 ELOVL6Q9H5J4 265 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 PLGRKTQ9HBL7 147 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 HS3ST4Q9Y661 456 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 SF3B1O75533 1304 aaKnown RBP eCLIP12.24□□□□□ -0.453e-6■■■■■ 137.9
COL20A1-201ENST00000358894 NPEPPSL1A6NEC2 478 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 C16orf96A6NNT2 1141 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 DNAJA2O60884 412 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 SNNO75324 88 aaPredicted RBP12.24□□□□□ -0.45
COL20A1-201ENST00000358894 LPOP22079 712 aaPredicted RBP12.24□□□□□ -0.45
COL20A1-201ENST00000358894 PURAQ00577 322 aaKnown RBP12.24□□□□□ -0.45
COL20A1-201ENST00000358894 BOP1Q14137 746 aaKnown RBP12.24□□□□□ -0.45
COL20A1-201ENST00000358894 RETSATQ6NUM9 610 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 TPGS1Q6ZTW0 290 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 C14orf80Q86SX3 495 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 CAMK1DQ8IU85 385 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 CENPLQ8N0S6 344 aaPredicted RBP12.24□□□□□ -0.45
COL20A1-201ENST00000358894 ADCY4Q8NFM4 1077 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 CAPSLQ8WWF8 208 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 ARNTL2Q8WYA1 636 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 CENPIQ92674 756 aaPredicted RBP12.24□□□□□ -0.45
COL20A1-201ENST00000358894 OSBPL2Q9H1P3 480 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 ASB8Q9H765 288 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 ATAD3AQ9NVI7 634 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 MKS1Q9NXB0 559 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 ANAPC2Q9UJX6 822 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 A0A088AWK7 358 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 A8MT66 165 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.24□□□□□ -0.45
COL20A1-201ENST00000358894 FCGR1AP12314 374 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 OR1D2P34982 312 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 STEAP4Q687X5 459 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 AFTPHQ6ULP2 937 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 NAPRTQ6XQN6 538 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 SLC2A13Q96QE2 648 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 BDH2Q9BUT1 245 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 DKK3Q9UBP4 350 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 GTF2IRD1Q9UHL9 959 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 BLOC1S6Q9UL45 172 aa12.24□□□□□ -0.45
COL20A1-201ENST00000358894 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 RPP40O75818 363 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 CNTN5O94779 1100 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 HDCP19113 662 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 S100A1P23297 94 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 WEE1P30291 646 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 XIAPP98170 497 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 VAC14Q08AM6 782 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 BFSP2Q13515 415 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 ACAP2Q15057 778 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TSNQ15631 228 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 ARMC12Q5T9G4 340 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 RGMBQ6NW40 437 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TRAF7Q6Q0C0 670 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 SLC24A5Q71RS6 500 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 MAPK15Q8TD08 544 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 MRPS31Q92665 395 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 C9orf16Q9BUW7 83 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 UNC93B1Q9H1C4 597 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 PLK2Q9NYY3 685 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 ZNHIT2Q9UHR6 403 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 ZNF197O14709 1029 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 PIP5K1BO14986 540 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 BCL10O95999 233 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 HALP42357 657 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 PPP3CCP48454 512 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 MLLT6P55198 1093 aaPredicted RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TRIM25Q14258 630 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TRIM60Q495X7 471 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 PLD3Q8IV08 490 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 ITFG1Q8TB96 612 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 FAM120BQ96EK7 910 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 A6NHS1 94 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 CFAP99D6REC4 459 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 MAP3K13O43283 966 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 NPHS1O60500 1241 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 NDST3O95803 873 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TACR2P21452 398 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TUFMP49411 452 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TTPAP49638 278 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 FAM98BQ52LJ0 330 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 FBXL22Q6P050 247 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 AGMOQ6ZNB7 445 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 ZNF534Q76KX8 674 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TXNDC5Q8NBS9 432 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 KIFC1Q9BW19 673 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 ABCG8Q9H221 673 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 FBRSL1Q9HCM7 1045 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 TRNAU1APQ9NX07 287 aaKnown RBP12.23□□□□□ -0.45
COL20A1-201ENST00000358894 SPATA7Q9P0W8 599 aa12.23□□□□□ -0.45
COL20A1-201ENST00000358894 GIMAP2Q9UG22 337 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms