RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CACNA1HO95180 2353 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 K7ESM1 405 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 GAPDHSO14556 408 aaPredicted RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 RRP9O43818 475 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 PCCBP05166 539 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 MYBL2P10244 700 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 HNRNPA2B1P22626 353 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 ITPKAP23677 461 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 DHPSP49366 369 aaPredicted RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 CLDN2P57739 230 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 LAMB3Q13751 1172 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 LRRC14Q15048 493 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 IRF4Q15306 451 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 ELF2Q15723 593 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 LPAL2Q16609 132 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 SKIDA1Q1XH10 827 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 HENMT1Q5T8I9 393 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 ANKMY2Q8IV38 441 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 GSPT2Q8IYD1 628 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 ZBED8Q8IZ13 594 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 NRSN1Q8IZ57 195 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 RGL4Q8IZJ4 473 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 DNASE2BQ8WZ79 361 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 STAMBPL1Q96FJ0 436 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 CDKN2AIPNLQ96HQ2 116 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 SERAC1Q96JX3 654 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 TBATAQ96M53 351 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 LENG8Q96PV6 779 aaPredicted RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 AGAP2Q99490 1192 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 FMO2Q99518 471 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 EBNA1BP2Q99848 306 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 RIOK2Q9BVS4 552 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 FAM129AQ9BZQ8 928 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 FAM83DQ9H4H8 585 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 SUDS3Q9H7L9 328 aaPredicted RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 MRM3Q9HC36 420 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 SAYSD1Q9NPB0 183 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 TREX1Q9NSU2 369 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 RPS6KL1Q9Y6S9 549 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 FAM237BA0A1B0GVD1 139 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 MAGEB16A2A368 324 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 RGSL1A5PLK6 1076 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 H0Y8X5 98 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 DYNC1I1O14576 645 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 GPR39O43194 453 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 SOD1P00441 154 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 PSMA3P25788 255 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 CD27P26842 260 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 IGFALSP35858 605 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 SPAM1P38567 509 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 HADHAP40939 763 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 DCDC1P59894 354 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 XIAPP98170 497 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 DPTQ07507 201 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 CBLBQ13191 982 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 PEX6Q13608 980 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 GON4LQ3T8J9 2241 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 ZC3H14Q6PJT7 736 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 FAM151BQ6UXP7 276 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 NLRP9Q7RTR0 991 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 SDK1Q7Z5N4 2213 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 TMEM135Q86UB9 458 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 TMEM145Q8NBT3 493 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 FBXO36Q8NEA4 188 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 PEX13Q92968 403 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 LRRC39Q96DD0 335 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 FCRL3Q96P31 734 aaPredicted RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 PLEKHG4BQ96PX9 1271 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 C1QTNF7Q9BXJ2 289 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 MIR1-1HGQ9H1L0 117 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 PLAC1Q9HBJ0 212 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 MTRF1LQ9UGC7 380 aaKnown RBP14.81□□□□□ -0.04
CCNE1-202ENST00000357943 RIMKLBQ9ULI2 386 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 DMTF1Q9Y222 760 aa14.81□□□□□ -0.04
CCNE1-202ENST00000357943 ATXN2Q99700 1313 aaKnown RBP14.8□□□□□ -0.04
CCNE1-202ENST00000357943 GLYATL1P3A0A0U1RQE8 302 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 POM121BA6NF01 834 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 OR51F1A6NGY5 319 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 PRAMEF26H0Y7S4 382 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 EIF3HO15372 352 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCNE1-202ENST00000357943 USP1O94782 785 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 RHOBTB1O94844 696 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 AKT2P31751 481 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 VSNL1P62760 191 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 ACVR1Q04771 509 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 INPP5AQ14642 412 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 ANKRD20A4Q4UJ75 823 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 LYSMD4Q5XG99 296 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 RAET1GQ6H3X3 334 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 PNCKQ6P2M8 343 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 ZNF765Q7L2R6 523 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 DENND6BQ8NEG7 585 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 C1orf216Q8TAB5 229 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 HDAC10Q969S8 669 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 ZNF669Q96BR6 464 aaPredicted RBP14.8□□□□□ -0.04
CCNE1-202ENST00000357943 BMFQ96LC9 184 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 SLC6A18Q96N87 628 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 C19orf43Q9BQ61 176 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 SPATA16Q9BXB7 569 aa14.8□□□□□ -0.04
CCNE1-202ENST00000357943 FOXP3Q9BZS1 431 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms