RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF317Q96PQ6 595 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RAB11FIP5Q9BXF6 653 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 KCTD5Q9NXV2 234 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NR2E1Q9Y466 385 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 MTF2Q9Y483 593 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CCDC182A6NF36 153 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RIIAD1A6NNX1 92 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 F8VP50 259 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FPGTO14772 594 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CHST10O43529 356 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 IDO1P14902 403 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CDH3P22223 829 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 MC4RP32245 332 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CAPGP40121 348 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RAB10P61026 200 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PARP15Q460N3 678 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 KLHL26Q53HC5 615 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CCNYL2Q5T2Q4 361 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CES3Q6UWW8 571 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FAM35AQ86V20 835 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FAM129CQ86XR2 697 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 IFNL1Q8IU54 200 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ENDOVQ8N8Q3 282 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ANKRD52Q8NB46 1076 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 AVL9Q8NBF6 648 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 OR4L1Q8NH43 312 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SPPL2BQ8TCT7 592 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 HIC2Q96JB3 615 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF670Q9BS34 389 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 BTBD10Q9BSF8 475 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 KCNK4Q9NYG8 393 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 MGAT4AQ9UM21 535 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RIMBP3CA6NJZ7 1639 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RIMBP3BA6NNM3 1639 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RIMBP3Q9UFD9 1639 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TPD52L2O43399 206 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SLITRK3O94933 977 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CFIP05156 583 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CXCR3P49682 368 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FPGSQ05932 587 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CACNG1Q06432 222 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RAB30Q15771 203 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 OLFML2AQ68BL7 652 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LRRC55Q6ZSA7 311 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ANKS1BQ7Z6G8 1248 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 STX12Q86Y82 276 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 HIPK1Q86Z02 1210 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CCDC54Q8NEL0 328 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 OR52K1Q8NGK4 314 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 OR2AJ1Q8NGZ0 328 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ADAMTS15Q8TE58 950 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PTCD2Q8WV60 388 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SNRNP27Q8WVK2 155 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 KAT5Q92993 513 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PLD4Q96BZ4 506 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RNF31Q96EP0 1072 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SLC47A1Q96FL8 570 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NKIRAS2Q9NYR9 191 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 GMPPBQ9Y5P6 360 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 A0A0X1KG70 313 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 IQCMA0A1B0GVH7 501 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RCCD1A6NED2 376 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TLX3O43711 291 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NOL4O94818 638 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 KDELR1P24390 212 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TNK2Q07912 1038 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 AKIRIN2Q53H80 203 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DUPD1Q68J44 220 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 GCNT7Q6ZNI0 430 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 RANBP3LQ86VV4 465 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 IQCF2Q8IXL9 164 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 BHLHE22Q8NFJ8 381 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 IPCEF1Q8WWN9 437 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FEM1CQ96JP0 617 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LMLNQ96KR4 655 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 AARSD1Q9BTE6 412 aaKnown RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PCBD2Q9H0N5 130 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ALKBH4Q9NXW9 302 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 C9J4A7 227 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TRBC1P01850 177 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NTRK1P04629 796 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LRRC32Q14392 662 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 HGSNATQ68CP4 663 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CHRDL2Q6WN34 429 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TMPRSS11AQ6ZMR5 421 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FAM92BQ6ZTR7 304 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NPAS4Q8IUM7 802 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 KIAA0319LQ8IZA0 1049 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ZBTB10Q96DT7 871 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PANX1Q96RD7 426 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DUSP16Q9BY84 665 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CCNB1IP1Q9NPC3 277 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CDH7Q9ULB5 785 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CHKBQ9Y259 395 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 POLR3HQ9Y535 204 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-202ENST00000356435 A0A0U1RQJ8 604 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SMIM35A0A1B0GVV1 85 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SIGLEC16A6NMB1 481 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 IRF6O14896 467 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PIGNO95427 931 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms