RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ZBTB5O15062 677 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 CA12O43570 354 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 ATG13O75143 517 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 LTFP02788 710 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 APRTP07741 180 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 FAM86B2P0C5J1 330 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 HDCP19113 662 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 ABCG1P45844 678 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 EMX1Q04741 257 aaPredicted RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 PRKCDQ05655 676 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 ZNF543Q08ER8 600 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 MGAT3Q09327 533 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 NOMO1Q15155 1222 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 SMTNL2Q2TAL5 461 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 ARL13AQ5H913 290 aaPredicted RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 PITRM1Q5JRX3 1037 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 STEAP4Q687X5 459 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 C16orf86Q6ZW13 317 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 ZNF534Q76KX8 674 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 DAW1Q8N136 415 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 MCRS1Q96EZ8 462 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 OXSMQ9NWU1 459 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 TEKT2Q9UIF3 430 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 DIMT1Q9UNQ2 313 aaKnown RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 PCDHB3Q9Y5E6 796 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 CCDC154A6NI56 674 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 DDNO94850 711 aaPredicted RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 KRT7P08729 469 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 ITGA2P17301 1181 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 ERP29P30040 261 aaKnown RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 LRPAP1P30533 357 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 SOX9P48436 509 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 SNRNP35Q16560 246 aaKnown RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 DDR2Q16832 855 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 ZNF517Q6ZMY9 492 aaPredicted RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 PLD3Q8IV08 490 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 SYTL1Q8IYJ3 562 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 LGALS12Q96DT0 336 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 RANGRFQ9HD47 186 aaPredicted RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 POLR3BQ9NW08 1133 aaPredicted RBP15.71■□□□□ 0.11
RTN3-205ENST00000356000 ANAPC2Q9UJX6 822 aa15.71■□□□□ 0.11
RTN3-205ENST00000356000 VNN1O95497 513 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 ITGBL1O95965 494 aaPredicted RBP15.7■□□□□ 0.1
RTN3-205ENST00000356000 CYP2A6P11509 494 aaPredicted RBP15.7■□□□□ 0.1
RTN3-205ENST00000356000 DNAJB2P25686 324 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 MAGEA12P43365 314 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 CCR10P46092 362 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 DNAJC24Q6P3W2 148 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 LAYNQ6UX15 382 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 SV2AQ7L0J3 742 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 PAPD5Q8NDF8 572 aaKnown RBP15.7■□□□□ 0.1
RTN3-205ENST00000356000 PPP1R13LQ8WUF5 828 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 SLC7A6Q92536 515 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 FYTTD1Q96QD9 318 aaKnown RBP15.7■□□□□ 0.1
RTN3-205ENST00000356000 GAD1Q99259 594 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 KIFC3Q9BVG8 833 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 FAM49AQ9H0Q0 323 aaPredicted RBP15.7■□□□□ 0.1
RTN3-205ENST00000356000 SDCBP2Q9H190 292 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 ACAD9Q9H845 621 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 NTN4Q9HB63 628 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 KCNE2Q9Y6J6 123 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 LRRC37AA6NMS7 1700 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 TRPM7Q96QT4 1865 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 TRPC5OSA6NMA1 111 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 ARHGEF9O43307 516 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 SNRPB2P08579 225 aaKnown RBP15.7■□□□□ 0.1
RTN3-205ENST00000356000 FASTKQ14296 549 aaKnown RBP15.7■□□□□ 0.1
RTN3-205ENST00000356000 MEP1AQ16819 746 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 TMEM65Q6PI78 240 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 MAPKAPK5Q8IW41 473 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 LILRB2Q8N423 598 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 OR4M2Q8NGB6 313 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 RORBQ92753 470 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 MOCOSQ96EN8 888 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 USB1Q9BQ65 265 aaKnown RBP15.7■□□□□ 0.1
RTN3-205ENST00000356000 C1orf112Q9NSG2 853 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 SNX7Q9UNH6 387 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 A3GALT2U3KPV4 340 aa15.7■□□□□ 0.1
RTN3-205ENST00000356000 E2F8A0AVK6 867 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 H0Y626 953 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 NRP2O60462 931 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 SOAT2O75908 522 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 LDLRP01130 860 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 MAPTP10636 758 aaKnown RBP15.69■□□□□ 0.1
RTN3-205ENST00000356000 EVI2BP34910 448 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 IL12RB1P42701 662 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 SNRPFP62306 86 aaKnown RBP15.69■□□□□ 0.1
RTN3-205ENST00000356000 FAPQ12884 760 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 SEMA5AQ13591 1074 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 GPAT3Q53EU6 434 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 AGKQ53H12 422 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 PM20D1Q6GTS8 502 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 LAIR2Q6ISS4 152 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 XKRXQ6PP77 449 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 PLEKHM3Q6ZWE6 761 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 CREB3L2Q70SY1 520 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 BEND5Q7L4P6 421 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 FBXO33Q7Z6M2 555 aa15.69■□□□□ 0.1
RTN3-205ENST00000356000 METTL3Q86U44 580 aaKnown RBP15.69■□□□□ 0.1
RTN3-205ENST00000356000 RAB43Q86YS6 212 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms