RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RIOK2Q9BVS4 552 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 FOXP3Q9BZS1 431 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 INTUQ9ULD6 942 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 CNOT6Q9ULM6 557 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 SLC17A4Q9Y2C5 497 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 ALG6Q9Y672 507 aa16.67■□□□□ 0.26
PDLIM7-201ENST00000355572 A0A0U1RQJ8 604 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 INPP4BO15327 924 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 EML2O95834 649 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 MT-CYBP00156 380 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 FGF1P05230 155 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 CD68P34810 354 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 GPR1P46091 355 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 HADHBP55084 474 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 CCDC173Q0VFZ6 552 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 AP1B1Q10567 949 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 HLTFQ14527 1009 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 NOMO1Q15155 1222 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 LRRC38Q5VT99 294 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 RBM44Q6ZP01 1051 aaKnown RBP16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 RHOT1Q8IXI2 618 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 Q8N9G6 341 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 NAT6Q93015 286 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 AP2M1Q96CW1 435 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 COX14Q96I36 57 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 HIC2Q96JB3 615 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 AGAP3Q96P47 875 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 POLR1BQ9H9Y6 1135 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 PHPT1Q9NRX4 125 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 AMACRQ9UHK6 382 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 PRKAB1Q9Y478 270 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 PCDHA13Q9Y5I0 950 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 CACNA1GO43497 2377 aa16.66■□□□□ 0.26
PDLIM7-201ENST00000355572 ZNF106Q9H2Y7 1883 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 F5H423 210 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 RPLP0P05388 317 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 MX2P20592 715 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 FECHP22830 423 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 TEAD1P28347 426 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 ADCY8P40145 1251 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 LSSP48449 732 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 RPIAP49247 311 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 EPHB1P54762 984 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 CTBSQ01459 385 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 WASHC5Q12768 1159 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 PRKD1Q15139 912 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 CERCAMQ5T4B2 595 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 ZNF648Q5T619 568 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 KAZNQ674X7 775 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 ADAMTSL4Q6UY14 1074 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 RAD9BQ6WBX8 426 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 SPOCD1Q6ZMY3 1216 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 MARK2Q7KZI7 788 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 C17orf82Q86X59 251 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 ATL2Q8NHH9 583 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 FGF11Q92914 225 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 GLMNQ92990 594 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 HAUS1Q96CS2 278 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 IMP4Q96G21 291 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 SCARF2Q96GP6 870 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 LYSMD1Q96S90 227 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 C10orf88Q9H8K7 445 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 NCKIPSDQ9NZQ3 722 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 TAAR2Q9P1P5 351 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 LCMT1Q9UIC8 334 aa16.65■□□□□ 0.26
PDLIM7-201ENST00000355572 LOC400499M0QZD8 3231 aa16.64■□□□□ 0.26
PDLIM7-201ENST00000355572 hCG_1818297A0A087WSY0 165 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 C1orf232A0A0U1RR37 186 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 ANKRD66B4E2M5 251 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 D6RAR5 112 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 B4GAT1O43505 415 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 SPOPO43791 374 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 DXOO77932 396 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 ATP1A1P05023 1023 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 IVLP07476 585 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 HGFP14210 728 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 ZNF30P17039 623 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 KELP23276 732 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 PTPN3P26045 913 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 SLC1A1P43005 524 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 B4GALNT1Q00973 533 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 C14orf28Q4W4Y0 310 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 SOWAHCQ53LP3 525 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 HENMT1Q5T8I9 393 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 SLC30A9Q6PML9 568 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 SPRED1Q7Z699 444 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 SPACA3Q8IXA5 215 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 NAGSQ8N159 534 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 LRRN3Q9H3W5 708 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 DPEP2Q9H4A9 486 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 ARFGAP3Q9NP61 516 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 EVA1BQ9NVM1 165 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 UBP1Q9NZI7 540 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 SPO11Q9Y5K1 396 aa16.64■□□□□ 0.25
PDLIM7-201ENST00000355572 AURKAO14965 403 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms