RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 UGP2Q16851 508 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 CDO1Q16878 200 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 ARTNQ5T4W7 220 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 RBM43Q6ZSC3 357 aaKnown RBP11.2□□□□□ -0.62
RTN3-204ENST00000354497 ZNF438Q7Z4V0 828 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 TRIM74Q86UV6 250 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 TRIM73Q86UV7 250 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 FAM114A1Q8IWE2 563 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 CCDC13Q8IYE1 715 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 CPT1CQ8TCG5 803 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 RTP4Q96DX8 246 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 AHCYL2Q96HN2 611 aaKnown RBP11.2□□□□□ -0.62
RTN3-204ENST00000354497 AGAP3Q96P47 875 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 GSDMAQ96QA5 445 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 TEFMQ96QE5 360 aaKnown RBP11.2□□□□□ -0.62
RTN3-204ENST00000354497 SLX1AQ9BQ83 275 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 LGR4Q9BXB1 951 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 WDR26Q9H7D7 661 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 CASS4Q9NQ75 786 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 TAAR2Q9P1P5 351 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 IMPACTQ9P2X3 320 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 KCTD3Q9Y597 815 aa11.2□□□□□ -0.62
RTN3-204ENST00000354497 CXorf51AA0A1B0GTR3 108 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 A8MX80 341 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 RECQL5O94762 991 aaPredicted RBP11.19□□□□□ -0.62
RTN3-204ENST00000354497 ELFN1P0C7U0 828 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 MMP12P39900 470 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 STAT1P42224 750 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 ABHD18Q0P651 414 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 C2CD6Q53TS8 623 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 CEACAM20Q6UY09 585 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 TIPARPQ7Z3E1 657 aaKnown RBP11.19□□□□□ -0.62
RTN3-204ENST00000354497 YTHDF3Q7Z739 585 aaKnown RBP11.19□□□□□ -0.62
RTN3-204ENST00000354497 TAX1BP1Q86VP1 789 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 ZNF761Q86XN6 746 aaPredicted RBP11.19□□□□□ -0.62
RTN3-204ENST00000354497 TRIM59Q8IWR1 403 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 GALNT11Q8NCW6 608 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 NT5C3BQ969T7 300 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 TBC1D31Q96DN5 1066 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 DHTKD1Q96HY7 919 aaPredicted RBP11.19□□□□□ -0.62
RTN3-204ENST00000354497 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
RTN3-204ENST00000354497 SUV39H2Q9H5I1 410 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 TMEM248Q9NWD8 314 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 IRAK4Q9NWZ3 460 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 MAP10Q9P2G4 905 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 OR12D3Q9UGF7 316 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 CTNND2Q9UQB3 1225 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 ATP8A1Q9Y2Q0 1164 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 KCNMB2Q9Y691 235 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 ANKRD36A6QL64 1941 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 UNC13CQ8NB66 2214 aa11.19□□□□□ -0.62
RTN3-204ENST00000354497 TEP1Q99973 2627 aaKnown RBP11.19□□□□□ -0.62
RTN3-204ENST00000354497 IGHV1OR21-1A0A087WYE8 117 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
RTN3-204ENST00000354497 FAM72CH0Y354 149 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TNFRSF10CO14798 259 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 SHOX2O60902 331 aaPredicted RBP11.18□□□□□ -0.62
RTN3-204ENST00000354497 STK17BO94768 372 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 SLC9A1P19634 815 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 DCTP40126 519 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 GPR3P46089 330 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 STX17P56962 302 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 ERV3-1Q14264 604 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 NR1D2Q14995 579 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 ACOX1Q15067 660 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 FAM72AQ5TYM5 149 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TTC19Q6DKK2 380 aaPredicted RBP11.18□□□□□ -0.62
RTN3-204ENST00000354497 FAM72DQ6L9T8 149 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TCTN3Q6NUS6 607 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TMEM71Q6P5X7 295 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 SLC47A2Q86VL8 602 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 NLRP14Q86W24 1093 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 FAM72BQ86X60 149 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 NRROSQ86YC3 692 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 SRRM1Q8IYB3 904 aaKnown RBP11.18□□□□□ -0.62
RTN3-204ENST00000354497 NELFBQ8WX92 580 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 CASKIN2Q8WXE0 1202 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 FAM81BQ96LP2 452 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 DPYSL5Q9BPU6 564 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 KLC2Q9H0B6 622 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 APMAPQ9HDC9 416 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 KLHL3Q9UH77 587 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 MYO6Q9UM54 1294 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 MFHAS1Q9Y4C4 1052 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 NBASA2RRP1 2371 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 TRBV23OR9-2A0A075B6M9 112 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 CDC14CA4D256 554 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 GOLGA6CA6NDK9 693 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 GOLGA6BA6NDN3 693 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 PDE2AO00408 941 aaPredicted RBP11.18□□□□□ -0.62
RTN3-204ENST00000354497 LIN7AO14910 233 aaPredicted RBP11.18□□□□□ -0.62
RTN3-204ENST00000354497 PPM1DO15297 605 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 AHCYL1O43865 530 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 KATNA1O75449 491 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 RFPL1O75677 317 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 SASH3O75995 380 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 GOLGA6DP0CG33 693 aa11.18□□□□□ -0.62
RTN3-204ENST00000354497 DLSTP36957 453 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms