RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 EPGNQ6UW88 154 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 CHST9Q7L1S5 443 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 LPCAT2Q7L5N7 544 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 SLC35B4Q969S0 331 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 SEMA3CQ99985 751 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 POLR1EQ9GZS1 481 aaKnown RBP18.62■□□□□ 0.57
SPNS1-204ENST00000352260 IL21Q9HBE4 155 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 TRPC7Q9HCX4 862 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 HACD3Q9P035 362 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 CHD5Q8TDI0 1954 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 H2AFYO75367 372 aaKnown RBP18.62■□□□□ 0.57
SPNS1-204ENST00000352260 GJB3O75712 270 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 VAPBO95292 243 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 RHOCP08134 193 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 CNPP09543 421 aaKnown RBP18.62■□□□□ 0.57
SPNS1-204ENST00000352260 NCF2P19878 526 aaPredicted RBP18.62■□□□□ 0.57
SPNS1-204ENST00000352260 RFTN1Q14699 578 aaPredicted RBP18.62■□□□□ 0.57
SPNS1-204ENST00000352260 PCLAFQ15004 111 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 ZNF423Q2M1K9 1284 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 PIGGQ5H8A4 983 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 IL31Q6EBC2 164 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 ITIH5Q86UX2 942 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 CNTN4Q8IWV2 1026 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 FIBCD1Q8N539 461 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 KYQ8NBH2 561 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 RP9Q8TA86 221 aaKnown RBP18.62■□□□□ 0.57
SPNS1-204ENST00000352260 HSPBAP1Q96EW2 488 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 VPS39Q96JC1 886 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 SLC22A12Q96S37 553 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 RANBP9Q96S59 729 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 SLX1AQ9BQ83 275 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 PRKD2Q9BZL6 878 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 CDH7Q9ULB5 785 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 ACTL7AQ9Y615 435 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 LAMA3Q16787 3333 aa18.62■□□□□ 0.57
SPNS1-204ENST00000352260 A0A1B0GVM2 712 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 RGSL1A5PLK6 1076 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 TCAF2A6NFQ2 919 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 TMEM114B3SHH9 223 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 TGM5O43548 720 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 E2F6O75461 281 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 BCAS2O75934 225 aaPredicted RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 PPARGP37231 505 aaPredicted RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 HTRA4P83105 476 aaPredicted RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 KIAA0930Q6ICG6 404 aaPredicted RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 HERC6Q8IVU3 1022 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 C7orf61Q8IZ16 206 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 ZNF597Q96LX8 424 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 CYP2S1Q96SQ9 504 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 SPON2Q9BUD6 331 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 MRPL40Q9NQ50 206 aaKnown RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 PNPLA3Q9NST1 481 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 TBC1D23Q9NUY8 699 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 STOML2Q9UJZ1 356 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 PLXNA4Q9HCM2 1894 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 LOC285095A0A1B0GVY8 99 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 ILVBLA1L0T0 632 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 HEATR9A2RTY3 570 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 KDELR3O43731 214 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 SUPT3HO75486 399 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 LYPLA1O75608 230 aaPredicted RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 PRKCGP05129 697 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 ATXN1LP0C7T5 689 aaKnown RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 PAMP19021 973 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 GLDCP23378 1020 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 GMPRP36959 345 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 OXCT1P55809 520 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 SMAD3P84022 425 aaKnown RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 ZNF177Q13360 481 aaPredicted RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 CCDC153Q494R4 210 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 SIRPB2Q5JXA9 342 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 PGAM4Q8N0Y7 254 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 TERB1Q8NA31 727 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 ACVR1CQ8NER5 493 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 SNRNP27Q8WVK2 155 aaKnown RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 COX4I2Q96KJ9 171 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 RHOJQ9H4E5 214 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 CAB39LQ9H9S4 337 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 PALMDQ9NP74 551 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 PTBP2Q9UKA9 531 aaKnown RBP18.61■□□□□ 0.57
SPNS1-204ENST00000352260 MYRFQ9Y2G1 1151 aa18.61■□□□□ 0.57
SPNS1-204ENST00000352260 MIA3Q5JRA6 1907 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 ALPK3Q96L96 1907 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 LAMA2P24043 3122 aaKnown RBP18.6■□□□□ 0.57
SPNS1-204ENST00000352260 E2F8A0AVK6 867 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 TRIM64CA6NLI5 447 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 H3BNH8 94 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 MPOP05164 745 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 GABRB3P28472 473 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 GRM3Q14832 879 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 CCDC92Q53HC0 331 aaPredicted RBP18.6■□□□□ 0.57
SPNS1-204ENST00000352260 C6orf52Q5T4I8 152 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 TSTD2Q5T7W7 516 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 TXNDC8Q6A555 127 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 ALG1LQ6GMV1 187 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 AMIGO2Q86SJ2 522 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 ZC3HC1Q86WB0 502 aaKnown RBP18.6■□□□□ 0.57
SPNS1-204ENST00000352260 DENND6AQ8IWF6 608 aa18.6■□□□□ 0.57
SPNS1-204ENST00000352260 ARL14EPQ8N8R7 260 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms