RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 GSK3BP49841 420 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 ATP4BP51164 291 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 CDKN2DP55273 166 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 RAB15P59190 212 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 SPIDRQ14159 915 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 CCNYL2Q5T2Q4 361 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 WSCD1Q658N2 575 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 SLC22A9Q8IVM8 553 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 CLYBLQ8N0X4 340 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 TERB1Q8NA31 727 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 TUBGCP3Q96CW5 907 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 UBXN10Q96LJ8 280 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 TMEM74Q96NL1 305 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 NSUN5Q96P11 429 aaKnown RBP17.76■□□□□ 0.43
VHL-202ENST00000345392 ALG2Q9H553 416 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 MID1IP1Q9NPA3 183 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 GID8Q9NWU2 228 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 GDAP2Q9NXN4 497 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.76■□□□□ 0.43
VHL-202ENST00000345392 GNPTGQ9UJJ9 305 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 ERGIC3Q9Y282 383 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 TIMM13Q9Y5L4 95 aaPredicted RBP17.76■□□□□ 0.43
VHL-202ENST00000345392 CACNG3O60359 315 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 KPNA6O60684 536 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 LILRA4P59901 499 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 GALNT1Q10472 559 aaPredicted RBP17.76■□□□□ 0.43
VHL-202ENST00000345392 FBXO48Q5FWF7 155 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 TMEM214Q6NUQ4 689 aaKnown RBP17.76■□□□□ 0.43
VHL-202ENST00000345392 NIPAL1Q6NVV3 410 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 ISCA2Q86U28 154 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 IGFN1Q86VF2 1251 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 TRUB1Q8WWH5 349 aaKnown RBP17.76■□□□□ 0.43
VHL-202ENST00000345392 KCTD13Q8WZ19 329 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 FCRL5Q96RD9 977 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 MROH8Q9H579 483 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 NANOGQ9H9S0 305 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 SLAMF8Q9P0V8 285 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 PCDHA9Q9Y5H5 950 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 MAGED1Q9Y5V3 778 aaPredicted RBP17.76■□□□□ 0.43
VHL-202ENST00000345392 DGKBQ9Y6T7 804 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 TSC2P49815 1807 aa17.76■□□□□ 0.43
VHL-202ENST00000345392 SYNCRIPO60506 623 aaKnown RBP17.75■□□□□ 0.43
VHL-202ENST00000345392 ANXA9O76027 345 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 SLC4A1P02730 911 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 HGFP14210 728 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 GJA5P36382 358 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 AIF1P55008 147 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 DIO3P55073 304 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 GRSF1Q12849 480 aaKnown RBP eCLIP17.75■□□□□ 0.43
VHL-202ENST00000345392 USP51Q70EK9 711 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ITIH5Q86UX2 942 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 COLGALT2Q8IYK4 626 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ATPAF2Q8N5M1 289 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ARRDC4Q8NCT1 418 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 TWIST2Q8WVJ9 160 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 PTERQ96BW5 349 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 SLC30A3Q99726 388 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 LHPPQ9H008 270 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 RRAGCQ9HB90 399 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 BAIAP3O94812 1187 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 CDK14O94921 469 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ALDH2P05091 517 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 SHMT2P34897 504 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ADARB1P78563 741 aaKnown RBP17.75■□□□□ 0.43
VHL-202ENST00000345392 KIAA0930Q6ICG6 404 aaPredicted RBP17.75■□□□□ 0.43
VHL-202ENST00000345392 PRMT9Q6P2P2 845 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 TMEM125Q96AQ2 219 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 CDCA5Q96FF9 252 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 TEX37Q96LM6 180 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ZNF560Q96MR9 790 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 KCTD14Q9BQ13 255 aaPredicted RBP17.75■□□□□ 0.43
VHL-202ENST00000345392 YIPF2Q9BWQ6 316 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ADNPQ9H2P0 1102 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 TUBB1Q9H4B7 451 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 NDFIP2Q9NV92 336 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 RIC8BQ9NVN3 520 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 CRYL1Q9Y2S2 319 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 VWA7Q9Y334 891 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 A0A1B0GTL3 188 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 TCRBV5S2A0A599 114 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 TMEM247A6NEH6 219 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 GPR32O75388 356 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 SNAI1O95863 264 aaPredicted RBP17.75■□□□□ 0.43
VHL-202ENST00000345392 HLA-DQB2P05538 268 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 GPIP06744 558 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 MBL2P11226 248 aaPredicted RBP17.75■□□□□ 0.43
VHL-202ENST00000345392 ADRA1AP35348 466 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 EIF2B2P49770 351 aaKnown RBP17.75■□□□□ 0.43
VHL-202ENST00000345392 CCNA1P78396 465 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ECT2LQ008S8 904 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 LIPEQ05469 1076 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 NFYCQ13952 458 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 MRGPRX2Q96LB1 330 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 ZFP42Q96MM3 310 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 RNF145Q96MT1 663 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 SMOQ99835 787 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 C1orf50Q9BV19 199 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 LTB4R2Q9NPC1 389 aa17.75■□□□□ 0.43
VHL-202ENST00000345392 RBM22Q9NW64 420 aaKnown RBP eCLIP17.75■□□□□ 0.43
VHL-202ENST00000345392 TMEM9Q9P0T7 183 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms