RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GPR1P46091 355 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 SPINT3P49223 89 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 ARRB1P49407 418 aaPredicted RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 CLDN2P57739 230 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 IRX4P78413 519 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 INPP5AQ14642 412 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 IRF4Q15306 451 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 TAF1AQ15573 450 aaPredicted RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 TPSAB1Q15661 275 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 CCDC6Q16204 474 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 WSCD2Q2TBF2 565 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 AASDHQ4L235 1098 aaPredicted RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 ESRP1Q6NXG1 681 aaKnown RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 PNCKQ6P2M8 343 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 NLRP9Q7RTR0 991 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 TECPR1Q7Z6L1 1165 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 PRUNE1Q86TP1 453 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 DCLK2Q8N568 766 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 GLIS1Q8NBF1 620 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 TP53I13Q8NBR0 393 aaPredicted RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 KRT12Q99456 494 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 C19orf43Q9BQ61 176 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 GORASP1Q9BQQ3 440 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 ERVMER34-1Q9H9K5 563 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 FZD3Q9NPG1 666 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 PHPT1Q9NRX4 125 aaPredicted RBP11.81□□□□□ -0.52
SNCA-202ENST00000345009 BFARQ9NZS9 450 aa11.81□□□□□ -0.52
SNCA-202ENST00000345009 A0A1W2PR77 199 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 POM121BA6NF01 834 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 FAM187AA6NFU0 413 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 RAD51BO15315 384 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 YKT6O15498 198 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 PCCBP05166 539 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 HOXC4P09017 264 aaPredicted RBP11.8□□□□□ -0.52
SNCA-202ENST00000345009 CD46P15529 392 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 HADHAP40939 763 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 MAGEA6P43360 314 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 NPY2RP49146 381 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 NXPH1P58417 271 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 DCDC1P59894 354 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 ARHGAP8P85298 464 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 PTK6Q13882 451 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 PTPRRQ15256 657 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 CDKN3Q16667 212 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 SKIDA1Q1XH10 827 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 KIF19Q2TAC6 998 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 DNTTIP2Q5QJE6 756 aaKnown RBP11.8□□□□□ -0.52
SNCA-202ENST00000345009 ARMC3Q5W041 872 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 RAET1GQ6H3X3 334 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 GCNT7Q6ZNI0 430 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 PRR23CQ6ZRP0 262 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 PPIL6Q8IXY8 311 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 BBOF1Q8ND07 529 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 OR52K1Q8NGK4 314 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 PLEKHG4BQ96PX9 1271 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 ZSCAN5AQ9BUG6 496 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 APOOQ9BUR5 198 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 GTPBP2Q9BX10 602 aaKnown RBP11.8□□□□□ -0.52
SNCA-202ENST00000345009 WDR26Q9H7D7 661 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 XAB2Q9HCS7 855 aaKnown RBP11.8□□□□□ -0.52
SNCA-202ENST00000345009 APPL1Q9UKG1 709 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 SPO11Q9Y5K1 396 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 DOCK9Q9BZ29 2069 aa11.8□□□□□ -0.52
SNCA-202ENST00000345009 DMDP11532 3685 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 HEATR9A2RTY3 570 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 CTAGE15A4D2H0 777 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 PATE3B3GLJ2 98 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 C1SP09871 688 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 TPH1P17752 444 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 ENGP17813 658 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 SDHBP21912 280 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 ADRA1DP25100 572 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 TRIM23P36406 574 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 BLKP51451 505 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 PFN3P60673 137 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 GRIK2Q13002 908 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 PDE1CQ14123 709 aaPredicted RBP11.79□□□□□ -0.52
SNCA-202ENST00000345009 SEPT6Q14141 434 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 SUZ12Q15022 739 aaKnown RBP11.79□□□□□ -0.52
SNCA-202ENST00000345009 SF3A2Q15428 464 aaKnown RBP11.79□□□□□ -0.52
SNCA-202ENST00000345009 PDPK2PQ6A1A2 396 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 DENND5AQ6IQ26 1287 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 LRRC8BQ6P9F7 803 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 ZNF572Q7Z3I7 529 aaPredicted RBP11.79□□□□□ -0.52
SNCA-202ENST00000345009 CTAGE6Q86UF2 777 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 JAMLQ86YT9 394 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 CEP112Q8N8E3 955 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 MCUQ8NE86 351 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 OR13H1Q8NG92 308 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 DTX3LQ8TDB6 740 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 BMFQ96LC9 184 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 SMIM14Q96QK8 99 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 RIOK2Q9BVS4 552 aaKnown RBP11.79□□□□□ -0.52
SNCA-202ENST00000345009 SPATA16Q9BXB7 569 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 FRMD8Q9BZ67 464 aaPredicted RBP11.79□□□□□ -0.52
SNCA-202ENST00000345009 IL22Q9GZX6 179 aa11.79□□□□□ -0.52
SNCA-202ENST00000345009 ABCG8Q9H221 673 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms