RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 VILLO15195 856 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 CD3EAPO15446 510 aaKnown RBP11.09□□□□□ -0.63
TRIM29-201ENST00000341846 CCL16O15467 120 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 CLDN11O75508 207 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 PRAMEF12O95522 483 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 GLP2RO95838 553 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 ALPIP09923 528 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 NCF1P14598 390 aaPredicted RBP11.09□□□□□ -0.63
TRIM29-201ENST00000341846 ARF5P84085 180 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 C6orf163Q5TEZ5 329 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 KLHDC10Q6PID8 442 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 GAREM2Q75VX8 874 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 APCDD1Q8J025 514 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 BBS5Q8N3I7 341 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 KLHL4Q9C0H6 718 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 MAGEH1Q9H213 219 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 ABCG8Q9H221 673 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 TNKS2Q9H2K2 1166 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
TRIM29-201ENST00000341846 RAI2Q9Y5P3 530 aa11.09□□□□□ -0.63
TRIM29-201ENST00000341846 FNDC1Q4ZHG4 1894 aaPredicted RBP11.08□□□□□ -0.63
TRIM29-201ENST00000341846 LRRC14BA6NHZ5 514 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 SMAD6O43541 496 aaKnown RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 HNRNPCL1O60812 293 aaKnown RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 CIB2O75838 187 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 FGF18O76093 207 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 CSKP41240 450 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 EPHB1P54762 984 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 AP2B1P63010 937 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 CYLC2Q14093 348 aaPredicted RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 CYTH1Q15438 398 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 RALGPS1Q5JS13 557 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 CXorf57Q6NSI4 855 aaKnown RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 KLHL35Q6PF15 583 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 CAMK1DQ8IU85 385 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 PDZD8Q8NEN9 1154 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 MDGA1Q8NFP4 955 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 GPR78Q96P69 363 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 KLF16Q9BXK1 252 aaPredicted RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 ILKAPQ9H0C8 392 aaPredicted RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 ARNT2Q9HBZ2 717 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 NSMCE4AQ9NXX6 385 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 ZBTB14O43829 449 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 OR1I1O60431 355 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 RFPL2O75678 378 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 KLHL2O95198 593 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 S1PR4O95977 384 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 TFEBP19484 476 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 LRRC73Q5JTD7 316 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 LIPMQ5VYY2 423 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 B3GNT6Q6ZMB0 384 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 CNTN4Q8IWV2 1026 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 ARHGAP24Q8N264 748 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 SREK1Q8WXA9 508 aaKnown RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 ISL2Q96A47 359 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 DGCR14Q96DF8 476 aaKnown RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 PSKH2Q96QS6 385 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 LIN28AQ9H9Z2 209 aaKnown RBP11.08□□□□□ -0.64
TRIM29-201ENST00000341846 SPATA7Q9P0W8 599 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 CFAP97Q9P2B7 532 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 PCDHGB4Q9UN71 923 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 PCDHB12Q9Y5F1 795 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 PCDHGB5Q9Y5G0 923 aa11.08□□□□□ -0.64
TRIM29-201ENST00000341846 ATP6AP2A0A1C7CYW4 349 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 IQCF5A8MTL0 148 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 ATP6AP2O75787 350 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 CXCL14O95715 111 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 PSMD7P51665 324 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 RHOAP61586 193 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 ZYG11AQ6WRX3 759 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 ACAD11Q709F0 780 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 GAB3Q8WWW8 586 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 ESAMQ96AP7 390 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 CDH19Q9H159 772 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 MRPL46Q9H2W6 279 aaKnown RBP11.07□□□□□ -0.64
TRIM29-201ENST00000341846 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.07□□□□□ -0.64
TRIM29-201ENST00000341846 MIA3Q5JRA6 1907 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 MROH6A6NGR9 719 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 SPECC1L-ADORA2AF8WAN1 911 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 PPP6CO00743 305 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 KDELR3O43731 214 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 PDE5AO76074 875 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 SIX3O95343 332 aaPredicted RBP11.07□□□□□ -0.64
TRIM29-201ENST00000341846 PEX2P28328 305 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 CRABP2P29373 138 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 ASPHQ12797 758 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 TUBB3Q13509 450 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 PDK3Q15120 406 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 FAM83EQ2M2I3 478 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 NADK2Q4G0N4 442 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 TMEM259Q4ZIN3 620 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 PPM1LQ5SGD2 360 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 GRAMD4Q6IC98 578 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 ZNF549Q6P9A3 640 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 KLHDC8BQ8IXV7 354 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 OR4L1Q8NH43 312 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 RIN3Q8TB24 985 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 SLC26A7Q8TE54 656 aa11.07□□□□□ -0.64
TRIM29-201ENST00000341846 STYXQ8WUJ0 223 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms