RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 NAB1Q13506 487 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 CTF1Q16619 201 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 FAM214AQ32MH5 1076 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 ZFP69Q49AA0 526 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 ZFYVE27Q5T4F4 411 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 DNAJC24Q6P3W2 148 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 CLYBLQ8N0X4 340 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 NDUFAF2Q8N183 169 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 PPM1NQ8N819 430 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 PSMA8Q8TAA3 256 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 PNPT1Q8TCS8 783 aaKnown RBP11.85□□□□□ -0.51
RTN3-203ENST00000341307 CYGBQ8WWM9 190 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 C18orf25Q96B23 403 aaPredicted RBP11.85□□□□□ -0.51
RTN3-203ENST00000341307 BTBD2Q9BX70 525 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 ALOXE3Q9BYJ1 711 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 NXF3Q9H4D5 531 aaKnown RBP11.85□□□□□ -0.51
RTN3-203ENST00000341307 ASB7Q9H672 318 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 RPRD1BQ9NQG5 326 aaKnown RBP11.85□□□□□ -0.51
RTN3-203ENST00000341307 COQ3Q9NZJ6 369 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 PCDHGC3Q9UN70 934 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 TCRBV5S1A1TA0A578 114 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 ISPDA4D126 451 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 TMEM191CA6NGB0 347 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 SGK1O00141 431 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 TRIM38O00635 465 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 NDUFA2O43678 99 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 UPK1BO75841 260 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 KRT37O76014 449 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 HTR1BP28222 390 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 BNIP2Q12982 314 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 NFX1Q12986 1120 aaKnown RBP11.85□□□□□ -0.51
RTN3-203ENST00000341307 SLC12A1Q13621 1099 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 HIST2H2ACQ16777 129 aaPredicted RBP11.85□□□□□ -0.51
RTN3-203ENST00000341307 CLVS2Q5SYC1 327 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 EPGNQ6UW88 154 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 SPATC1Q76KD6 591 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 PCGF5Q86SE9 256 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 EMC1Q8N766 993 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 CELF2-AS1Q8N7Q2 184 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 POC5Q8NA72 575 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 LHFPL5Q8TAF8 219 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 UBA3Q8TBC4 463 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 MAPK15Q8TD08 544 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 OR52B2Q96RD2 323 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 CPXM1Q96SM3 734 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 FAM96AQ9H5X1 160 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 EPS8L2Q9H6S3 715 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 CCSER2Q9H7U1 834 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 COG4Q9H9E3 785 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 LIN7BQ9HAP6 207 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 KLK14Q9P0G3 267 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 EMCNQ9ULC0 261 aa11.85□□□□□ -0.51
RTN3-203ENST00000341307 KIAA0100Q14667 2235 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 TRIP11Q15643 1979 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 NRCAMQ92823 1304 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 TCRBV3S1A0A5B6 114 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 HMX2A2RU54 273 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 MYADML2A6NDP7 307 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 CENPXA8MT69 81 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 CTDSP2O14595 271 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 ABCB7O75027 752 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 XYLBO75191 536 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 CILPO75339 1184 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 DAB1O75553 588 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 AMHP03971 560 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 RALBP11234 206 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 ATF7P17544 494 aaPredicted RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 ARCN1P48444 511 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 PPP5CP53041 499 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 GDF10P55107 478 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 RHAGQ02094 409 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 GALNT3Q14435 633 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 RHOT1Q8IXI2 618 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 TCAIMQ8N3R3 496 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 PACRGLQ8N7B6 248 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 C12orf29Q8N999 325 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 JOSD2Q8TAC2 188 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 DUS3LQ96G46 650 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 ST6GAL2Q96JF0 529 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 RNF170Q96K19 258 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 ASB2Q96Q27 587 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 IL20Q9NYY1 176 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 IL37Q9NZH6 218 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 AP4E1Q9UPM8 1137 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 HCRTO43612 131 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 LSM8O95777 96 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 CD4P01730 458 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 CALB1P05937 261 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 ITGAVP06756 1048 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 CBLP22681 906 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 EEF1B2P24534 225 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 FMO4P31512 558 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 SEPHS1P49903 392 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 NDST1P52848 882 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 PTPN11Q06124 597 aaPredicted RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 TRIM25Q14258 630 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 C6orf132Q5T0Z8 1188 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 CCNJQ5T5M9 372 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 STEAP3Q658P3 488 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms