RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TDGQ13569 410 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 APOFQ13790 326 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 NEPROQ6NW34 567 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 PRMT9Q6P2P2 845 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 SLC41A1Q8IVJ1 513 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 HOMEZQ8IX15 550 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 TEX26Q8N6G2 289 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 PACRGLQ8N7B6 248 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 TMEM105Q8N8V8 129 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 TXNDC5Q8NBS9 432 aaKnown RBP10.79□□□□□ -0.68
RTN3-201ENST00000338850 PHC3Q8NDX5 983 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 GPR150Q8NGU9 434 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 TRPC4APQ8TEL6 797 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 CCDC124Q96CT7 223 aaKnown RBP10.79□□□□□ -0.68
RTN3-201ENST00000338850 RCN3Q96D15 328 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 IMP4Q96G21 291 aaKnown RBP10.79□□□□□ -0.68
RTN3-201ENST00000338850 FUBP3Q96I24 572 aaKnown RBP eCLIP10.79□□□□□ -0.68
RTN3-201ENST00000338850 SCYL1Q96KG9 808 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 SUSD3Q96L08 255 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 MRGPRX2Q96LB1 330 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 MYADMQ96S97 322 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 CLSTN3Q9BQT9 956 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 TTPALQ9BTX7 342 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 SLC25A23Q9BV35 468 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 FICDQ9BVA6 458 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 MRPL1Q9BYD6 325 aaKnown RBP10.79□□□□□ -0.68
RTN3-201ENST00000338850 SLC2A11Q9BYW1 496 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 PTTG2Q9NZH5 202 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 COX16Q9P0S2 106 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 DUSP12Q9UNI6 340 aa10.79□□□□□ -0.68
RTN3-201ENST00000338850 IGLV3-10A0A075B6K4 115 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 LOC100653049A0A140TA62 436 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 TCRBV3S1A0A5B6 114 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 ANKRD33BA6NCL7 494 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 MROH6A6NGR9 719 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 TNFRSF10BO14763 440 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 PHGDHO43175 533 aaKnown RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 DNAJA2O60884 412 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 PAGE1O75459 146 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 KRT34O76011 436 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 VAPBO95292 243 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 PEX11BO96011 259 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 EPOP01588 193 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 HLA-DQB2P05538 268 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 FGF4P08620 206 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 C7P10643 843 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 RHOQP17081 205 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 OGNP20774 298 aaKnown RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 PSMA3P25788 255 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 EPHA3P29320 983 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 RENBPP51606 427 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 CLCNKBP51801 687 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 USP46P62068 366 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 TXNL4AP83876 142 aaKnown RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 TSPY1Q01534 308 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 RHDQ02161 417 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 FOLH1Q04609 750 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 FOXM1Q08050 763 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 ELAVL2Q12926 359 aaKnown RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 DLG1Q12959 904 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 GRIK2Q13002 908 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 LSAMPQ13449 338 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 OLIG2Q13516 323 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 CEACAM7Q14002 265 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 TRIM25Q14258 630 aaKnown RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 CNGA3Q16281 694 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 CNPY1Q3B7I2 92 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 GRAMD1BQ3KR37 738 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 TCHHL1Q5QJ38 904 aaPredicted RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 FAM171A1Q5VUB5 890 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 AP1ARQ63HQ0 302 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 LPCAT4Q643R3 524 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 ALG1LQ6GMV1 187 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 ASTLQ6HA08 431 aaPredicted RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 MFSD6LQ8IWD5 586 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 ZNF683Q8IZ20 524 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 CHCHD4Q8N4Q1 142 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 TMEM102Q8N9M5 508 aaPredicted RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 C3orf58Q8NDZ4 430 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 ACVR1CQ8NER5 493 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 ADAM32Q8TC27 787 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 SPPL2BQ8TCT7 592 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 NXNL1Q96CM4 212 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 SLC39A13Q96H72 371 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 PRICKLE1Q96MT3 831 aaPredicted RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 CDRT15Q96T59 188 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 FSD1LQ9BXM9 530 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 NUF2Q9BZD4 464 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 SLC39A8Q9C0K1 460 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 FAM86C1Q9NVL1 165 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 TMEM248Q9NWD8 314 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 COMMD8Q9NX08 183 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 CPSF2Q9P2I0 782 aaKnown RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 PCDHB8Q9UN66 801 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 TLR6Q9Y2C9 796 aa10.78□□□□□ -0.68
RTN3-201ENST00000338850 ZFHX2Q9C0A1 2572 aaPredicted RBP10.78□□□□□ -0.68
RTN3-201ENST00000338850 FAM92AA1XBS5 289 aa10.77□□□□□ -0.69
RTN3-201ENST00000338850 A8MT66 165 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms