RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 OC90Q02509 493 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 DNASE1L3Q13609 305 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 HKDC1Q2TB90 917 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 BEND5Q7L4P6 421 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 GPR180Q86V85 440 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 RALGPS2Q86X27 583 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 GPR65Q8IYL9 337 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SNX33Q8WV41 574 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 MECRQ9BV79 373 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 LEF1Q9UJU2 399 aaPredicted RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 RWDD3Q9Y3V2 267 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 CCNDBP1O95273 360 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 UBA1P22314 1058 aaKnown RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ADSSP30520 456 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 RARRES1P49788 294 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SQLEQ14534 574 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 PSMD5Q16401 504 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SNAPC1Q16533 368 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 C5orf22Q49AR2 442 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 LYPLAL1Q5VWZ2 237 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SLC8B1Q6J4K2 584 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 SLC22A15Q8IZD6 547 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 HDAC7Q8WUI4 952 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 AP3S1Q92572 193 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 GFM1Q96RP9 751 aaKnown RBP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 HCN3Q9P1Z3 774 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHANK2-201ENST00000338508 ALKQ9UM73 1620 aa11.76□□□□□ -0.53
SHANK2-201ENST00000338508 C15orf38-AP3S2A0A0A6YYH1 394 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SLC31A1O15431 190 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CFIP05156 583 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TGFB3P10600 412 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 EFNA1P20827 205 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 OR1D2P34982 312 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 RPL22P35268 128 aaKnown RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 C2orf80Q0P641 193 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ABRAXAS1Q6UWZ7 409 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ARPINQ7Z6K5 226 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TMEM86AQ8N2M4 240 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 NKX2-3Q8TAU0 364 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 PPP3R2Q96LZ3 170 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SLC38A3Q99624 504 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SLC28A3Q9HAS3 691 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 KCNQ5Q9NR82 932 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 DGKBQ9Y6T7 804 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 RGSL1A5PLK6 1076 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 FAM86C2PA6NEL3 165 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 C22orf31O95567 290 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ALOX5P09917 674 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 EPHA3P29320 983 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CAPZA1P52907 286 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TSPAN5P62079 268 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 PLGLB1Q02325 96 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TOR1AIP1Q5JTV8 583 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 DENND5AQ6IQ26 1287 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 C17orf64Q86WR6 236 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 EFHD2Q96C19 240 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 MTMR9Q96QG7 549 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 LPOP22079 712 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CDH13P55290 713 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ERVK-21P61565 698 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TTI2Q6NXR4 508 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 LINGO4Q6UY18 593 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SLC43A3Q8NBI5 491 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 MTMR8Q96EF0 704 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CERS2Q96G23 380 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TOR3AQ9H497 397 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 NMUR1Q9HB89 426 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 PRDM8Q9NQV8 689 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 EXD2Q9NVH0 621 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 A8MUA0 341 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ACKR2O00590 384 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 FSBPO95073 299 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CHRM5P08912 532 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 FAUP35544 74 aaKnown RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CTSKP43235 329 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SP3Q02447 781 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 MXD1Q05195 221 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 HSPB3Q12988 150 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SLC13A2Q13183 592 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 LRRC73Q5JTD7 316 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 KLHL35Q6PF15 583 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 KYAT3Q6YP21 454 aaKnown RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 CPA6Q8N4T0 437 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 NDRG1Q92597 394 aaKnown RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ALG2Q9H553 416 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 PMF1-BGLAPU3KQ54 211 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 LRRC72A6NJI9 287 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 A8MU76 341 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 SMAD9O15198 467 aaKnown RBP11.75□□□□□ -0.53
SHANK2-201ENST00000338508 TRBC1P01850 177 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 ACTR3P61158 418 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 VBP1P61758 197 aa11.75□□□□□ -0.53
SHANK2-201ENST00000338508 DGKZQ13574 1117 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms