RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 A0A1W2PQ67 120 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 EIF4E1BA6NMX2 242 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 D6RAR5 112 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 KCNK1O00180 336 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 TRBC1P01850 177 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 GLB1P16278 677 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 MPSTP25325 297 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 ALDH4A1P30038 563 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 SLC5A2P31639 672 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 EPHB1P54762 984 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 SKOR1P84550 965 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 ZFP36L1Q07352 338 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 PDK2Q15119 407 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 NKAIN2Q5VXU1 208 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 ZNF574Q6ZN55 896 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 JAMLQ86YT9 394 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 LPCAT1Q8NF37 534 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 CTNNBL1Q8WYA6 563 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 FAF2Q96CS3 445 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 AP2M1Q96CW1 435 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 POLR1EQ9GZS1 481 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 BRD8Q9H0E9 1235 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 UVRAGQ9P2Y5 699 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 APPL1Q9UKG1 709 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 CNOT6Q9ULM6 557 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 HEY1Q9Y5J3 304 aa13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 OAS3Q9Y6K5 1087 aaKnown RBP13.32□□□□□ -0.28
NUDCD3-201ENST00000338427 C3orf70A6NLC5 250 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 PDE2AO00408 941 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 PLD2O14939 933 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 ATXN7O15265 892 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 PPM1DO15297 605 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 AKR1B10O60218 316 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 ZIC2O95409 532 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 EML2O95834 649 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 ATP1A1P05023 1023 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 TMEM253P0C7T8 217 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 CD86P42081 329 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 STC1P52823 247 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 ZBTB17Q13105 803 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 CLN3Q13286 438 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 QPCTQ16769 361 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 RALGPS1Q5JS13 557 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 ZNF648Q5T619 568 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 KIAA1614Q5VZ46 1190 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 IGF2-ASQ6U949 168 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 USP45Q70EL2 814 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 SPRED1Q7Z699 444 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 C17orf82Q86X59 251 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 ZNF761Q86XN6 746 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 LRRC49Q8IUZ0 686 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 CCDC13Q8IYE1 715 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 NAGSQ8N159 534 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 PLD5Q8N7P1 536 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 WDR48Q8TAF3 677 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 GRAMD1AQ96CP6 724 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 IQCDQ96DY2 449 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 DNAJC7Q99615 494 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 ZNF670Q9BS34 389 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 TDRD1Q9BXT4 1180 aaKnown RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 NHEJ1Q9H9Q4 299 aaPredicted RBP13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 PCDH9Q9HC56 1237 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 ARFGAP3Q9NP61 516 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 PISDQ9UG56 409 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 TFR2Q9UP52 801 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 SLC17A4Q9Y2C5 497 aa13.31□□□□□ -0.28
NUDCD3-201ENST00000338427 LRRD1A4D1F6 860 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 PSMD11O00231 422 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 ASMTLO95671 621 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 KRT7P08729 469 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 PIRTP0C851 137 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 CCL4P13236 92 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 CD1CP29017 333 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 CFHR1Q03591 330 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 DPTQ07507 201 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 C16orf72Q14CZ0 275 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 PHF19Q5T6S3 580 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 BROXQ5VW32 411 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 ALG1LQ6GMV1 187 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 CLEC14AQ86T13 490 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 ZFAND4Q86XD8 727 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 MAP7D3Q8IWC1 876 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 RCBTB1Q8NDN9 531 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 OR6C4Q8NGE1 309 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 EID2BQ96D98 161 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 LIN37Q96GY3 246 aaPredicted RBP13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 NUDT22Q9BRQ3 303 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 GSDMCQ9BYG8 508 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 DPH1Q9BZG8 443 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 SEMA4CQ9C0C4 833 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 TRNAU1APQ9NX07 287 aaKnown RBP13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 ZNHIT2Q9UHR6 403 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 LOXL2Q9Y4K0 774 aa13.3□□□□□ -0.28
NUDCD3-201ENST00000338427 RHPN2P1A8MT19 583 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 FADS2P1A8MWK0 482 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms