RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FAM124BQ9H5Z6 455 aaPredicted RBP13.73□□□□□ -0.21
RTN4-202ENST00000337526 C8orf4Q9NR00 106 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 LYVE1Q9Y5Y7 322 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 TAF4O00268 1085 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 SNPHO15079 494 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 NMBRP28336 390 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 PRDX6P30041 224 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 TAF10Q12962 218 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 ABRQ12979 859 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 LEMD2Q8NC56 503 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 CMASQ8NFW8 434 aaPredicted RBP13.73□□□□□ -0.21
RTN4-202ENST00000337526 CLHC1Q8NHS4 586 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 Q96MT0 163 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 PNPLA8Q9NP80 782 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 SESN1Q9Y6P5 492 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 A0A1W2PQH9 124 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 C9JVG2 144 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CCL22O00626 93 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 NDST3O95803 873 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 GUCA1AP43080 201 aaPredicted RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 GPD2P43304 727 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 GALK1P51570 392 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 POLR2JP52435 117 aaKnown RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 TAS2R39P59534 338 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 LILRA4P59901 499 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CSNK2BP67870 215 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 SLC35G1Q2M3R5 365 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 LYPLAL1Q5VWZ2 237 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 SLC7A8Q9UHI5 535 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CORO2BQ9UQ03 480 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 ANGPT4Q9Y264 503 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 TCAF1Q9Y4C2 921 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 SUV39H1O43463 412 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 TBX10O75333 385 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CXCR2P25025 360 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 NTSP30990 170 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 RPL3P39023 403 aaKnown RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 ATAD1Q8NBU5 361 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 COL26A1Q96A83 441 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 AGAP2Q99490 1192 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 HNRNPABQ99729 332 aaKnown RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 DPEP3Q9H4B8 488 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 HMX1Q9NP08 348 aaPredicted RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 MRPL17Q9NRX2 175 aaKnown RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 H3BNX3 289 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 TNNI3P19429 210 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CDH3P22223 829 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 HNF4AP41235 474 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 ATXN1P54253 815 aaKnown RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 ATP12AP54707 1039 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 NRLP54845 237 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 YBEYP58557 167 aaPredicted RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 ACTR3P61158 418 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CA9Q16790 459 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 FBXO48Q5FWF7 155 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 PPM1LQ5SGD2 360 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 ARMC3Q5W041 872 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 TRIM40Q6P9F5 258 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 OR6K2Q8NGY2 324 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 MCRS1Q96EZ8 462 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 SLC47A1Q96FL8 570 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 SLC25A51Q9H1U9 297 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CLEC4MQ9H2X3 399 aaPredicted RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 SQORQ9Y6N5 450 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 NPEPPSL1A6NEC2 478 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 QSOX1O00391 747 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 PEX10O60683 326 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CCNHP51946 323 aaPredicted RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 LIPEQ05469 1076 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 ACAP2Q15057 778 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 TXNRD3NBQ6F5E7 133 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 DENND6AQ8IWF6 608 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 CAPSLQ8WWF8 208 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 OMA1Q96E52 524 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 GPR21Q99679 349 aa13.72□□□□□ -0.21
RTN4-202ENST00000337526 SMPD3Q9NY59 655 aaPredicted RBP13.72□□□□□ -0.21
RTN4-202ENST00000337526 UGT1A9O60656 530 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 RHOQP17081 205 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 NDUFV1P49821 464 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 AQP4P55087 323 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 SIM2Q14190 667 aaPredicted RBP13.71□□□□□ -0.21
RTN4-202ENST00000337526 UBR7Q8N806 425 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 NIPA2Q8N8Q9 360 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 NAT14Q8WUY8 206 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 UGT1A7Q9HAW7 530 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 UGT1A10Q9HAW8 530 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 UGT1A8Q9HAW9 530 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 ZNF232Q9UNY5 417 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 OR10H3O60404 316 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 TMCC2O75069 709 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 LGR5O75473 907 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 CLDN11O75508 207 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 FTH1P02794 183 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 NR2F1P10589 423 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 SLC6A2P23975 617 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms