RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CD101Q93033 1021 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 CDK5RAP1Q96SZ6 601 aaKnown RBP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 ADAM2Q99965 735 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 CIPCQ9C0C6 399 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 USE1Q9NZ43 259 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 ZNF224Q9NZL3 707 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 COL20A1Q9P218 1284 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 NOCTQ9UK39 431 aaKnown RBP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 ADAM28Q9UKQ2 775 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 RAP2CQ9Y3L5 183 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 CPQQ9Y646 472 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 UNCXA6NJT0 531 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 HNRNPLP14866 589 aaKnown RBP eCLIP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 WEE1P30291 646 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 CD86P42081 329 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 CD300CQ08708 224 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 COLEC12Q5KU26 742 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 UTP15Q8TED0 518 aaKnown RBP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 LHX5Q9H2C1 402 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 ST6GALNAC4Q9H4F1 302 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 ABCC13Q9NSE7 274 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 ADPRHL2Q9NX46 363 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 MORF4L1Q9UBU8 362 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 OAZ3Q9UMX2 235 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 CENPBD1B2RD01 187 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 RPLP2P05387 115 aaKnown RBP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 C2P06681 752 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 HPCAL1P37235 193 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 PRKCQQ04759 706 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 BOP1Q14137 746 aaKnown RBP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 CA9Q16790 459 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 KLHL17Q6TDP4 642 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 VASH1Q7L8A9 365 aaPredicted RBP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 PIWIL3Q7Z3Z3 882 aaKnown RBP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 NEURL2Q9BR09 285 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 ZSCAN5AQ9BUG6 496 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 ZNF358Q9NW07 568 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 TMEM9Q9P0T7 183 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 PTBP2Q9UKA9 531 aaKnown RBP16.05■□□□□ 0.16
NPHP3-201ENST00000337331 PCDHGB5Q9Y5G0 923 aa16.05■□□□□ 0.16
NPHP3-201ENST00000337331 CCDC182A6NF36 153 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 BTN3A3O00478 584 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 PLSCR1O15162 318 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 FAM20BO75063 409 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 BLVRAP53004 296 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 PON2Q15165 354 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 DLG2Q15700 870 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CCDC142Q17RM4 750 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 ZNF544Q6NX49 715 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 UBA2Q9UBT2 640 aaPredicted RBP16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CNOT6Q9ULM6 557 aaKnown RBP16.04■□□□□ 0.16
NPHP3-201ENST00000337331 NRCAMQ92823 1304 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 A0A087X1B8 175 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 PIRTP0C851 137 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CSH1P0DML2 217 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CSH2P0DML3 217 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CAPGP40121 348 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CLCQ05315 142 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 FSCN1Q16658 493 aaKnown RBP16.04■□□□□ 0.16
NPHP3-201ENST00000337331 IL27RAQ6UWB1 636 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 GPSM1Q86YR5 675 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 RELL1Q8IUW5 271 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 ITFG1Q8TB96 612 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 STAG3L4Q8TBR4 150 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 ASB2Q96Q27 587 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 TINF2Q9BSI4 451 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CAB39LQ9H9S4 337 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.04■□□□□ 0.16
NPHP3-201ENST00000337331 FETUBQ9UGM5 382 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 B4GALT4O60513 344 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 KPNA6O60684 536 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CYP2C18P33260 490 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 CHI3L1P36222 383 aaPredicted RBP16.04■□□□□ 0.16
NPHP3-201ENST00000337331 SLC16A1P53985 500 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 APOL4Q9BPW4 351 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 TPRKBQ9Y3C4 175 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 ANKRD26Q9UPS8 1709 aa16.04■□□□□ 0.16
NPHP3-201ENST00000337331 STK25O00506 426 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 MLNP12872 115 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 SLC7A1P30825 629 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 IL2P60568 153 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 MAXP61244 160 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 CNTN1Q12860 1018 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 CAMK2GQ13555 558 aaPredicted RBP16.03■□□□□ 0.16
NPHP3-201ENST00000337331 CEACAM7Q14002 265 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 CXCL17Q6UXB2 119 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 CHSY3Q70JA7 882 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 SH3BP5LQ7L8J4 393 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 GPC2Q8N158 579 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 PLD5Q8N7P1 536 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 TBC1D15Q8TC07 691 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 SLC29A1Q99808 456 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 PDGFDQ9GZP0 370 aaPredicted RBP16.03■□□□□ 0.16
NPHP3-201ENST00000337331 CCDC177Q9NQR7 707 aaPredicted RBP16.03■□□□□ 0.16
NPHP3-201ENST00000337331 PCDHA2Q9Y5H9 948 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 BCAS2O75934 225 aaPredicted RBP16.03■□□□□ 0.16
NPHP3-201ENST00000337331 URODP06132 367 aa16.03■□□□□ 0.16
NPHP3-201ENST00000337331 AKR1A1P14550 325 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms