RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ZFP57Q9NU63 452 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NXF1Q9UBU9 619 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PHF3Q92576 2039 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 POLR2CP19387 275 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FABP6P51161 128 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FOXO4P98177 505 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAN2A1Q16706 1144 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF792Q3KQV3 632 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM180BQ6P0A1 224 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PDZD9Q8IXQ8 264 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NETO2Q8NC67 525 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC24A4Q8NFF2 622 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 LINGO1Q96FE5 620 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF560Q96MR9 790 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GINM1Q9NU53 330 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TBC1D13Q9NVG8 400 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 UCKL1Q9NWZ5 548 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NCKAP1Q9Y2A7 1128 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 EFCAB9A8MZ26 197 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 F9P00740 461 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CTSHP09668 335 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 IL7P13232 177 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NCALDP61601 193 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 DPYDQ12882 1025 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GTF2H3Q13889 308 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SNAPC1Q16533 368 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CHRDL2Q6WN34 429 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADHFE1Q8IWW8 467 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GJA10Q969M2 543 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CDK15Q96Q40 435 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 DMRTA2Q96SC8 542 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 EYA1Q99502 592 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 MACROD1Q9BQ69 325 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 BPIFA3Q9BQP9 254 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 IDI2Q9BXS1 227 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM49BQ9NUQ9 324 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM47E-STBD1D6RA91 191 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 IRS4O14654 1257 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 MATN3O15232 486 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GRK5P34947 590 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC16A2P36021 539 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TTLL4Q14679 1199 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 TIGD2Q4W5G0 525 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PAN2Q504Q3 1202 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 RIPPLY2Q5TAB7 128 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF517Q6ZMY9 492 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM131BQ86XD5 332 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CLYBLQ8N0X4 340 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CENPSQ8N2Z9 138 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 LCORLQ8N3X6 602 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GALNT4Q8N4A0 578 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FBXO39Q8N4B4 442 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF548Q8NEK5 533 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 JOSD2Q8TAC2 188 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 HYLS1Q96M11 299 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PHOX2BQ99453 314 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NUDT9Q9BW91 350 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CAMK2AQ9UQM7 478 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 PCDHB5Q9Y5E4 795 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC28A1O00337 649 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZBTB22O15209 634 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 DNAJB6O75190 326 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADH1CP00326 375 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 IFNA6P05013 189 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 CD48P09326 243 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GSTM2P28161 218 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 RPS9P46781 194 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 EEF1A1P68104 462 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 EEF1A2Q05639 463 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM98BQ52LJ0 330 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 EEF1A1P5Q5VTE0 462 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADGRD2Q7Z7M1 963 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARHGAP12Q8IWW6 846 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR2L3Q8NG85 312 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ULK4Q96C45 1275 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NXPE2Q96DL1 559 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 HS6ST2Q96MM7 605 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 RBM14Q96PK6 669 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 GON7Q9BXV9 100 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 YTHDF1Q9BYJ9 559 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZSWIM5Q9P217 1185 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARMCX1Q9P291 453 aa6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 EIF3LQ9Y262 564 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 NOP16Q9Y3C1 178 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC16A3O15427 465 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP2D6P10635 497 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SHMT1P34896 483 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARRB1P49407 418 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 BAMBIQ13145 260 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAMLD1Q13495 774 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAD2L1BPQ15013 274 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 AOC3Q16853 763 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 LARP4Q71RC2 724 aaKnown RBP eCLIP6.05□□□□□ -1.443e-6■■□□□ 13.3
CDC42BPA-201ENST00000334218 ZNF677Q86XU0 584 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR14A2Q96R54 314 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ACOXLQ9NUZ1 547 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 B3GALT1Q9Y5Z6 326 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 TTC37Q6PGP7 1564 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 HLA-DOAP06340 250 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms