RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PSAPL1Q6NUJ1 521 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 OR6K2Q8NGY2 324 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 NR1H4Q96RI1 486 aaPredicted RBP18.88■□□□□ 0.61
RFTN1-201ENST00000334133 SCUBE2Q9NQ36 999 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 FKBPLQ9UIM3 349 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 MED16Q9Y2X0 877 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 MYOCOSA0A1B0GUC4 107 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 H3BNC9 293 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 NR5A2O00482 541 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 ACOT8O14734 319 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 MRASO14807 208 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 NIPSNAP2O75323 286 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 PRLP01236 227 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 RHOCP08134 193 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 CHRM3P20309 590 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 PRDX3P30048 256 aaKnown RBP18.88■□□□□ 0.61
RFTN1-201ENST00000334133 ATN1P54259 1190 aaPredicted RBP18.88■□□□□ 0.61
RFTN1-201ENST00000334133 SQLEQ14534 574 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 PTPRNQ16849 979 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 SETMARQ53H47 684 aaPredicted RBP18.88■□□□□ 0.61
RFTN1-201ENST00000334133 FATE1Q969F0 183 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 SPATA17Q96L03 361 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 AARSD1Q9BTE6 412 aaKnown RBP18.88■□□□□ 0.61
RFTN1-201ENST00000334133 SEPT3Q9UH03 358 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 NPEPPSL1A6NEC2 478 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 TBC1D4O60343 1298 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 NDUFS3O75489 264 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 RNASEH2AO75792 299 aaKnown RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 EEF1DP29692 281 aaKnown RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 SLC11A2P49281 568 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 LRP8Q14114 963 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 TLR1Q15399 786 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 GSTA3Q16772 222 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 UGT3A2Q3SY77 523 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 THEMIS2Q5TEJ8 643 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 RNF219Q5W0B1 726 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 FAM117BQ6P1L5 589 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 LARP4Q71RC2 724 aaKnown RBP eCLIP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 FAM110BQ8TC76 370 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 RNF112Q9ULX5 631 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 PRRC2BQ5JSZ5 2229 aaKnown RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 ZNF840PA6NDX5 716 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 SLC22A2O15244 555 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 INSIG1O15503 277 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 CLASP2O75122 1294 aaKnown RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 SNRPB2P08579 225 aaKnown RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 ADSLP30566 484 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 ACVR1Q04771 509 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 PLD1Q13393 1074 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 OGFRL1Q5TC84 451 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 FUNDC1Q8IVP5 155 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 SIDT2Q8NBJ9 832 aaKnown RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 GBP5Q96PP8 586 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 MGME1Q9BQP7 344 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 CCDC68Q9H2F9 335 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 VCX3BQ9H321 246 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 AGO1Q9UL18 857 aaKnown RBP18.87■□□□□ 0.61
RFTN1-201ENST00000334133 PDK3Q15120 406 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 VPS26BQ4G0F5 336 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 KIAA1841Q6NSI8 718 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 ANKS3Q6ZW76 656 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 TWIST2Q8WVJ9 160 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 TUBGCP3Q96CW5 907 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 FAR2Q96K12 515 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 PSKH2Q96QS6 385 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 TUBB1Q9H4B7 451 aa18.87■□□□□ 0.61
RFTN1-201ENST00000334133 BTN3A1O00481 513 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 KIF1CO43896 1103 aaKnown RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 BCAS2O75934 225 aaPredicted RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 STC2O76061 302 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 ZNF140P52738 457 aaPredicted RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 SATB1Q01826 763 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 STX5Q13190 355 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 CYTH1Q15438 398 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 ZRANB3Q5FWF4 1079 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 RETREG3Q86VR2 466 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 LPGAT1Q92604 370 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 L3HYPDHQ96EM0 354 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 CCDC97Q96F63 343 aaPredicted RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 ATOH8Q96SQ7 321 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 MAGEH1Q9H213 219 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 RIMS3Q9UJD0 308 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 RAI2Q9Y5P3 530 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 PRAMEF12O95522 483 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 HSPA1AP0DMV8 641 aaKnown RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 HSPA1BP0DMV9 641 aaKnown RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 SLC7A2P52569 658 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 POLE2P56282 527 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 TWF1Q12792 350 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 ZNF177Q13360 481 aaPredicted RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 ADGRE1Q14246 886 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 CAPRIN1Q14444 709 aaKnown RBP18.86■□□□□ 0.61
RFTN1-201ENST00000334133 NRF1Q16656 503 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 HECTD3Q5T447 861 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 C6orf52Q5T4I8 152 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 CLYBLQ8N0X4 340 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 BBS5Q8N3I7 341 aa18.86■□□□□ 0.61
RFTN1-201ENST00000334133 CNBD2Q96M20 576 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms