RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CWH43Q9H720 699 aa14.83□□□□□ -0.04
CLCNKA-201ENST00000331433 BPIFA1Q9NP55 256 aa14.83□□□□□ -0.04
CLCNKA-201ENST00000331433 CDK14O94921 469 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 CD160O95971 181 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 C1RP00736 705 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 PENKP01210 267 aaPredicted RBP14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 F11P03951 625 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 GFAPP14136 432 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 HOXB8P17481 243 aaPredicted RBP14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 FOXA1P55317 472 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 SQLEQ14534 574 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 PSAPL1Q6NUJ1 521 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 PDSS2Q86YH6 399 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 PIANPQ8IYJ0 282 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 TTC16Q8NEE8 873 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 ZNF461Q8TAF7 563 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 C19orf60Q96EN9 201 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 MRPL1Q9BYD6 325 aaKnown RBP14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 POPDC3Q9HBV1 291 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 MID1IP1Q9NPA3 183 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 INTS10Q9NVR2 710 aaKnown RBP14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 GALPQ9UBC7 116 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 GIMAP2Q9UG22 337 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 FKBPLQ9UIM3 349 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 VPS28Q9UK41 221 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 TBC1D30Q9Y2I9 924 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 YIPF1Q9Y548 306 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 C2orf81A6NN90 581 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 FBP2O00757 339 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 OR1I1O60431 355 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 NDUFS3O75489 264 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 TMCC1O94876 653 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 ME2P23368 584 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 PAX7P23759 505 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 AQP4P55087 323 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 RFTN1Q14699 578 aaPredicted RBP14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 GEN1Q17RS7 908 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 UGT3A2Q3SY77 523 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 TMCO2Q7Z6W1 182 aaPredicted RBP14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 RNF168Q8IYW5 571 aaPredicted RBP14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 BHLHE22Q8NFJ8 381 aaPredicted RBP14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 GATA6Q92908 595 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 BHMTQ93088 406 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 KCNA7Q96RP8 456 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 KLHL4Q9C0H6 718 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 CCDC68Q9H2F9 335 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 DNAJC15Q9Y5T4 150 aa14.82□□□□□ -0.04
CLCNKA-201ENST00000331433 GNRH1P01148 92 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 LINGO3P0C6S8 592 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 MZF1P28698 734 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 ALDH1A3P47895 512 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 TRAF2Q12933 501 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 PTK2BQ14289 1009 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 TSNQ15631 228 aaKnown RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 PTPRNQ16849 979 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 MMEL1Q495T6 779 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 LARP4Q71RC2 724 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 CHST9Q7L1S5 443 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 RHEBL1Q8TAI7 183 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 TRPC4APQ8TEL6 797 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 ZNF296Q8WUU4 475 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 SLC22A12Q96S37 553 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 GPR21Q99679 349 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 SLC30A3Q99726 388 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 KLF16Q9BXK1 252 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 TFB2MQ9H5Q4 396 aaKnown RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 TAS2R13Q9NYV9 303 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 ADA2Q9NZK5 511 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 ARIH1Q9Y4X5 557 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 PCDHGA7Q9Y5G6 932 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 MICAL3Q7RTP6 2002 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 ANAPC1Q9H1A4 1944 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 A0A1B0GTL3 188 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 SUPT3HB4E1H0 165 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 ANKRD66B4E2M5 251 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 GPR39O43194 453 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 SUPT3HO75486 399 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 ABLIM3O94929 683 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 ALDOCP09972 364 aaKnown RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 PSME3P61289 254 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 SPOUT1Q5T280 376 aaKnown RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 REP15Q6BDI9 236 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 PAOXQ6QHF9 649 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 CLYBLQ8N0X4 340 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 CARNMT1Q8N4J0 409 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 MYRFLQ96LU7 910 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 CEP295NLQ96MC4 621 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 BIRC8Q96P09 236 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 DEFB118Q96PH6 123 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 DDX50Q9BQ39 737 aaKnown RBP14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 RETREG1Q9H6L5 497 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 CACNA2D2Q9NY47 1150 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 RNF112Q9ULX5 631 aa14.81□□□□□ -0.04
CLCNKA-201ENST00000331433 GBF1Q92538 1859 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 CDC7O00311 574 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 CLASP2O75122 1294 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 CXCL10P02778 98 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 LPOP22079 712 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 MC4RP32245 332 aa14.8□□□□□ -0.04
CLCNKA-201ENST00000331433 NME5P56597 212 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms