RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TFEBP19484 476 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 ZRANB3Q5FWF4 1079 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 KLC3Q6P597 504 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 EPGNQ6UW88 154 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 ADIPOR2Q86V24 386 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 RYBPQ8N488 228 aaPredicted RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 MAPK15Q8TD08 544 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 UTP4Q969X6 686 aaKnown RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 PTERQ96BW5 349 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 FAM136AQ96C01 138 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 TUBB6Q9BUF5 446 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 CCDC106Q9BWC9 280 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 POMKQ9H5K3 350 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 COG4Q9H9E3 785 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 GALPQ9UBC7 116 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 HECAQ9UBI9 543 aaPredicted RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 ZDHHC2Q9UIJ5 367 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 FNDC3AQ9Y2H6 1198 aaKnown RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 ZNF197O14709 1029 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 CCDC22O60826 627 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 SERPINA6P08185 405 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 SNRPD1P62314 119 aaKnown RBP16.9■□□□□ 0.3
DDX41-201ENST00000330503 PTPRNQ16849 979 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 TMEM215Q68D42 235 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 C22orf39Q6P5X5 142 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 KIAA0907Q7Z7F0 614 aaPredicted RBP16.9■□□□□ 0.3
DDX41-201ENST00000330503 CCNYL1Q8N7R7 359 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 INPP5DQ92835 1189 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 ALG9Q9H6U8 611 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 CERS4Q9HA82 394 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 YBX2Q9Y2T7 364 aaKnown RBP16.9■□□□□ 0.3
DDX41-201ENST00000330503 MRPS23Q9Y3D9 190 aaKnown RBP16.9■□□□□ 0.3
DDX41-201ENST00000330503 PKP3Q9Y446 797 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 GBF1Q92538 1859 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 A8MT66 165 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 GAPDHSO14556 408 aaPredicted RBP16.9■□□□□ 0.3
DDX41-201ENST00000330503 NPHS1O60500 1241 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 SRP72O76094 671 aaKnown RBP16.9■□□□□ 0.3
DDX41-201ENST00000330503 RHOBTB1O94844 696 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 CA5AP35218 305 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 ALDH18A1P54886 795 aaKnown RBP16.9■□□□□ 0.3
DDX41-201ENST00000330503 SHHQ15465 462 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 CYB5D1Q6P9G0 228 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 TRIM67Q6ZTA4 783 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 MYLIPQ8WY64 445 aa16.9■□□□□ 0.3
DDX41-201ENST00000330503 H3BMM5 538 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 MATN2O00339 956 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 GPR39O43194 453 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 GRID2O43424 1007 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 CLDN7O95471 211 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 ZNF37AP17032 561 aaPredicted RBP16.89■□□□□ 0.29
DDX41-201ENST00000330503 TTPAP49638 278 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 RPL14P50914 215 aaKnown RBP16.89■□□□□ 0.29
DDX41-201ENST00000330503 ECT2LQ008S8 904 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 ASPHQ12797 758 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 CARD16Q5EG05 197 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 PAQR3Q6TCH7 311 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 NAT16Q8N8M0 369 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 AGR3Q8TD06 166 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 RSPRY1Q96DX4 576 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 SAMD11Q96NU1 681 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 SHCBP1LQ9BZQ2 653 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 ZFYVE1Q9HBF4 777 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 CYP4F12Q9HCS2 524 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 MARK1Q9P0L2 795 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 ZMYM5Q9UJ78 669 aa16.89■□□□□ 0.29
DDX41-201ENST00000330503 APOBEC2Q9Y235 224 aaKnown RBP16.89■□□□□ 0.29
DDX41-201ENST00000330503 IPO13O94829 963 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 PKMP14618 531 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 PTPN4P29074 926 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 SERPINA4P29622 427 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 CACNG1Q06432 222 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 PRKAA1Q13131 559 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 PDAP1Q13442 181 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 OR4D1Q15615 310 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 ACCSLQ4AC99 568 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 SLC9B1Q4ZJI4 515 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 CTSL3PQ5NE16 218 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 TAS2R42Q7RTR8 314 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 SMG7Q92540 1137 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 ECHDC3Q96DC8 303 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 OTUB2Q96DC9 234 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 SLC30A3Q99726 388 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 CEP44Q9C0F1 390 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 SUV39H2Q9H5I1 410 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 KLC4Q9NSK0 619 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 SLC25A13Q9UJS0 675 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 FAM50BQ9Y247 325 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 OAS3Q9Y6K5 1087 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 BNIP3LO60238 219 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 MGRN1O60291 552 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 DIAPH2O60879 1101 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 PBX2P40425 430 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 UBAP2LQ14157 1087 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 DMC1Q14565 340 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 ELMSAN1Q6PJG2 1045 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 DPY19L3Q6ZPD9 716 aa16.88■□□□□ 0.29
DDX41-201ENST00000330503 PIWIL4Q7Z3Z4 852 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 PCDH20Q8N6Y1 951 aaKnown RBP16.88■□□□□ 0.29
DDX41-201ENST00000330503 CCDC126Q96EE4 140 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms