RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 STT3AP46977 705 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 MAD2L1Q13257 205 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 KLHL35Q6PF15 583 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 KDM1BQ8NB78 822 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 TMIGD2Q96BF3 282 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 LRRC58Q96CX6 371 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 AGO3Q9H9G7 860 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 EXOSC4Q9NPD3 245 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 MTMR10Q9NXD2 777 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 ACTR3BQ9P1U1 418 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 G3V2T6 193 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 SPTLC1O15269 473 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 RECQL5O94762 991 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 SIX3O95343 332 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 KRT75O95678 551 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 DNAJB13P59910 316 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 ARHGAP1Q07960 439 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 SPIDRQ14159 915 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 NFE2Q16621 373 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF280DQ6N043 979 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 CENPIQ92674 756 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 ABHD8Q96I13 439 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 APOL4Q9BPW4 351 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 PALMDQ9NP74 551 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 ADARB2Q9NS39 739 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 IFT80Q9P2H3 777 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 PCDHGB4Q9UN71 923 aa12.72□□□□□ -0.37
DNMT3A-202ENST00000321117 PRORSD1PA6NEY8 169 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 TCAF2A6NFQ2 919 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 GPR182O15218 404 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 RAD51BO15315 384 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 ONECUT3O60422 494 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 DSC2Q02487 901 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 TUBB3Q13509 450 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 PDPRQ8NCN5 879 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 RAB2BQ8WUD1 216 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 S100ZQ8WXG8 99 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 KCTD13Q8WZ19 329 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 CDCA5Q96FF9 252 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 FBXL20Q96IG2 436 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF512Q96ME7 567 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 FBXO44Q9H4M3 255 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 NADKO95544 446 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 CYBBP04839 570 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 MTHFRP42898 656 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 HERVK_113P63132 956 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 PGS1Q32NB8 556 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF829Q3KNS6 432 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 TLK2Q86UE8 772 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 CEP97Q8IW35 865 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 OR2T12Q8NG77 320 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 ERVK-6Q9BXR3 956 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 WDR12Q9GZL7 423 aaKnown RBP12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 ACTR8Q9H981 624 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.37
DNMT3A-202ENST00000321117 J3QRK9 145 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 PGK1P00558 417 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 FGF1P05230 155 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 HLA-DQB2P05538 268 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 GSNP06396 782 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 ITGB6P18564 788 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 EDNRBP24530 442 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 GSK3BP49841 420 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 GALNT3Q14435 633 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 SPOUT1Q5T280 376 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 RAP1GAP2Q684P5 730 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 PPP4R4Q6NUP7 873 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 GCNT7Q6ZNI0 430 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 SLCO6A1Q86UG4 719 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 FIBCD1Q8N539 461 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 DCBLD1Q8N8Z6 715 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 OR9Q1Q8NGQ5 310 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 LPPQ93052 612 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 FBXL8Q96CD0 374 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 PLEKHA8Q96JA3 519 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 PARK7Q99497 189 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 CRLS1Q9UJA2 301 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 PRSS51A0A1B0GVH4 220 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 SMIM35A0A1B0GVV1 85 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 BMP10O95393 424 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 SEC24AO95486 1093 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 HLA-DPA1P20036 260 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 CCDC142Q17RM4 750 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 TXNDC11Q6PKC3 985 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 OSTM1Q86WC4 334 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 ADGRE3Q9BY15 652 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 TBCCD1Q9NVR7 557 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 IMPAD1Q9NX62 359 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 GDAP2Q9NXN4 497 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 ADAMTS5Q9UNA0 930 aa12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 RGS14O43566 566 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 MMP3P08254 477 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF177Q13360 481 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 TTLL9Q3SXZ7 439 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 NOMO2Q5JPE7 1267 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms