RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 PPCDCQ96CD2 204 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 MEMO1Q9Y316 297 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 CHRNA5P30532 468 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 GPD2P43304 727 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 ASMTP46597 345 aa16.85■□□□□ 0.29
SMCHD1-201ENST00000320876 GIMD1P0DJR0 217 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 PSEN1P49768 467 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 FAM171A1Q5VUB5 890 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 GALNTL5Q7Z4T8 443 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 ZBTB46Q86UZ6 589 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 FAM71AQ8IYT1 594 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 EPS8L1Q8TE68 723 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 CIB1Q99828 191 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 TNKS2Q9H2K2 1166 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 MARCH7Q9H992 704 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 EMC3Q9P0I2 261 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 TRPS1Q9UHF7 1281 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 FAM86B1E9PN63 330 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 FPGTO14772 594 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 XYLBO75191 536 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 GCATO75600 419 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 ADAM8P78325 824 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 SNAPC1Q16533 368 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 CPSF7Q8N684 471 aaKnown RBP16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 EFCAB3Q8N7B9 438 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 ANGPTL1O95841 491 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 CYP4F8P98187 520 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 ACVR2BQ13705 512 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 PGAM4Q8N0Y7 254 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 TRNT1Q96Q11 434 aaKnown RBP16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 DNMT3LQ9UJW3 386 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 CLEC4AQ9UMR7 237 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 PRELID1Q9Y255 219 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 CD163L1Q9NR16 1453 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 TRBC1P01850 177 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 AP5B1Q2VPB7 878 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 NXNL1Q96CM4 212 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 C12orf66Q96MD2 445 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 NPR2P20594 1047 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 MMP14P50281 582 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 MARSP56192 900 aaKnown RBP16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 FCGR1BQ92637 280 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 ZYG11BQ9C0D3 744 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 CCDC177Q9NQR7 707 aaPredicted RBP16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 SOHLH2Q9NX45 425 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 ARID1BQ8NFD5 2236 aaPredicted RBP16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 ZSCAN5DPP0CG00 497 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 PTX3P26022 381 aaPredicted RBP16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 DUPD1Q68J44 220 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 BEND5Q7L4P6 421 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 SMURF2Q9HAU4 748 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 CAPN8A6NHC0 703 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 PRDX6P30041 224 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 PCBP1Q15365 356 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 AHSA2Q719I0 299 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 RBFAQ8N0V3 343 aa16.84■□□□□ 0.29
SMCHD1-201ENST00000320876 KPNA3O00505 521 aaPredicted RBP16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 CCNDBP1O95273 360 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 CCNHP51946 323 aaPredicted RBP16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 ZNF234Q14588 700 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 MPPE1Q53F39 396 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 GRIN3AQ8TCU5 1115 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 MRPL9Q9BYD2 267 aaKnown RBP16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 SLCO1B3Q9NPD5 702 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 PAK6Q9NQU5 681 aaPredicted RBP16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 MKLN1Q9UL63 735 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 PSKH1P11801 424 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 TUFMP49411 452 aaKnown RBP16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 PTPRNQ16849 979 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 NPNTQ6UXI9 565 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 TMC8Q8IU68 726 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 SLITRK4Q8IW52 837 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 RHBGQ9H310 441 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 KCNE2Q9Y6J6 123 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 U3KQV3 271 aa16.83■□□□□ 0.29
SMCHD1-201ENST00000320876 SNAPC5O75971 98 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 PAPSS2O95340 614 aaPredicted RBP16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 BMT2Q1RMZ1 405 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 MFSD5Q6N075 450 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 LINGO1Q96FE5 620 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 ALG2Q9H553 416 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 EVA1BQ9NVM1 165 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 USP4Q13107 963 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 LPCAT4Q643R3 524 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 TRABD2AQ86V40 505 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 ZNF433Q8N7K0 673 aaPredicted RBP16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 PRR5-ARHGAP8B1AHC4 643 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 H3BRB1 525 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 ACKR2O00590 384 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 ARHGAP8P85298 464 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 LIN52Q52LA3 116 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 FAM183BPQ6ZVS7 135 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 TMEM192Q8IY95 271 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 TUT1Q9H6E5 874 aaKnown RBP16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 PLEKHA1Q9HB21 404 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 ABCB9Q9NP78 766 aa16.83■□□□□ 0.28
SMCHD1-201ENST00000320876 SMCO3A2RU48 225 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms